Protein

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Genbank accession
CBW38038.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFAQPKGSTSKETNKDSIARKFGCKKSEVVYAKAGQSLSGYKVIYDKVSQRAYSLPSNIGAVTVTSLVDGILTHSGGTVDLNELAMTRREFITLQGDFVSGVTVNAKHEVIAYGNSRFRWDGDLPKVVPPNSEPVIPDWVNVDANPALSELAKSVGSSLVGYKPTGTTTTTGTVKGKLDSFIDFANDYCGGPITGQPDLTSQLQQAIIDAFNSGIADIKIVGDFYISGMILWYPGVRLIGGRYDSTLIRVSNTFPVGGTMFRSYRPPLWAAGCHGLSLENVYLVGRAAKDVYGIDINDASYFNLEGVRLDLFDKAISFNRWIDETRVDTSGTITYPNAHSAEMGGQSYFGTITRCYAGNCVTCVDFNGVVNRCTFISNTWTTSDLAYNFSNPRGVYETNTFITCNIEGVKSAFEWFFSINSPYHNVWINTSIDNGNPDITSLAKDGGRQTFIGLAIFPYGNPSLVNWYGINPNGHRSTVLGTDLGENLPEDQLKTQVREELHTLTGIANKQWAGQQVTETIPANGYKALNISVPGLKGNSAVIASLSAIYHGITVDAASNNTGTVSVIISNYTGSPIDVNAYLSVTGIAKSFL
Physico‐chemical
properties
protein length:596 AA
molecular weight: 64450,56470 Da
isoelectric point:5,81891
aromaticity:0,10235
hydropathy:-0,12819

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
91–137
IPR040775 DC_1937
CBW38038.1
1 596
Architecture
ATT
STR
RBD
ATT 1-155 | STR 197-476 | RBD 477-595 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CBW38038.1
1 596
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,9940
Central domain 204 488 286 0,9913
C-terminal 489 596 107 0,9634
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-488
C-terminal
489-596

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Vi01
[NCBI] 		2991283 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
5802524f98da3917bb109c62ee912369d4ce865eacfc48c065b54f23376401ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50