Protein

View in Explore
UniProt accession
A0A8S5VLE7 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MALHEVQLKGYSVRPGNLSLGTFGSYGIEQLHVTIDDTWSGLAVTATFNPPKGEPREIRVPENGLIDVPAEATANEGTGTIVYCGVANGVQRITKTQGYNVITRGNVGGTAPFKPSESLATQVLQAALNAEKNSAEAKSAADDLRNDAANGKFDGKDGAKGDKGDTGPRGPVGPQGPQGEKGVQGPAGATGATGPQGKQGIQGEKGDTGERGPQGEQGVQGVQGEKGDTGAQGPVGETGPVGPKGDTGPQGERGEQGPQGEVGPEGPAGKDGVQIDDAAVSEDAPWSSKHIIDMLCPPLEESGNPVVCYPVAGYPLGVKASWEPMQEGTGTPSPENIRPIKGRDSVTVNQADGLRAWKMLTLDGTEEWTVSGKFLDNKTDWYYVSSKIPDAINTQPQKGNEICSHYPHADVANNNTMQGCAIVWGSIRVRWGDTIPNDADAWKAYLAAQNAAGTPVQIAYKLKKLVVVPDTNGIFFSEQPAQGGSGDPSPDNIRPILLNNAVQVGQTNTLTLPETVYGGEVDAVSGKGQKVWKSVALDGTEEWTLQTTNIPGKVGFTFQVPEIVTPMSPEIKGDIVCSQYPTISANDTYRCKNGISVEAGNNHYFRIYNDTYAEGTVDEWKSYLATQYAAGTPVQVCYKLAEPVPFTATGAQPIHALAGVNTVLTDADSATVTGRADPIKRITDLEDAVASQT
Physico‐chemical
properties
protein length:693 AA
molecular weight: 72720,66240 Da
isoelectric point:4,75961
aromaticity:0,06205
hydropathy:-0,49582

Domains

Domains [InterPro]
DC_0620
STR
1–224
DC_0620
Coil
Unmapped
127–147
Coil IPR050149
DC_0341
STR
199–664
DC_0341
A0A8S5VLE7
1 693
Architecture
STR
STR 1-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Pantevenvirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG91127.1 [NCBI]
Genbank nucleotide accession
BK035285 [NCBI]
CDS location
range 11276 -> 13357
strand +
CDS
ATGGCATTGCATGAAGTACAGCTGAAAGGGTACAGTGTTCGACCCGGCAACTTATCGCTTGGCACTTTTGGCAGTTACGGTATCGAGCAGCTGCATGTGACCATTGACGATACGTGGAGCGGTCTTGCTGTAACGGCAACGTTTAACCCGCCGAAGGGCGAACCCCGTGAAATACGTGTGCCGGAAAACGGCCTGATTGATGTGCCTGCCGAAGCAACCGCCAATGAGGGTACGGGCACTATCGTGTATTGCGGCGTTGCCAATGGGGTGCAGCGCATCACAAAAACGCAGGGATACAACGTGATTACGCGCGGAAACGTTGGTGGAACTGCGCCGTTTAAACCCAGTGAATCGCTTGCCACGCAGGTTTTGCAGGCTGCACTTAACGCAGAAAAGAACAGCGCGGAAGCAAAGAGTGCGGCTGATGACCTGCGGAATGATGCGGCTAACGGGAAATTTGACGGCAAGGATGGAGCCAAAGGCGACAAGGGCGATACTGGCCCGCGAGGCCCCGTAGGCCCGCAGGGGCCGCAAGGAGAAAAGGGAGTTCAAGGCCCTGCCGGGGCAACGGGTGCAACTGGCCCGCAAGGCAAGCAGGGTATCCAGGGCGAGAAGGGCGACACCGGAGAGCGCGGCCCCCAAGGTGAGCAGGGCGTTCAGGGTGTACAAGGCGAGAAGGGCGATACCGGCGCGCAGGGGCCTGTTGGCGAAACTGGCCCGGTTGGCCCCAAGGGTGATACTGGCCCGCAGGGTGAGCGCGGTGAGCAGGGGCCGCAGGGAGAGGTTGGCCCGGAGGGGCCTGCCGGAAAGGACGGCGTACAGATTGATGATGCGGCGGTGAGCGAGGACGCGCCGTGGAGCAGCAAGCACATCATTGATATGCTCTGCCCCCCGCTGGAAGAAAGCGGCAACCCTGTTGTGTGTTATCCTGTGGCGGGATACCCGCTGGGGGTAAAGGCCAGCTGGGAACCCATGCAGGAGGGCACGGGAACGCCGTCACCGGAGAACATCCGTCCCATCAAGGGACGTGACAGCGTGACAGTTAATCAGGCGGATGGATTACGGGCGTGGAAAATGCTGACGCTGGACGGAACAGAAGAATGGACGGTATCGGGCAAGTTTTTGGACAATAAAACCGATTGGTACTATGTATCGTCAAAAATTCCAGACGCTATCAATACACAACCGCAGAAAGGCAACGAAATTTGCAGCCACTATCCTCATGCGGATGTTGCTAACAACAATACCATGCAAGGATGTGCCATTGTGTGGGGCAGTATCCGTGTACGCTGGGGCGACACAATCCCAAATGATGCTGATGCCTGGAAAGCCTACCTTGCCGCCCAGAACGCCGCAGGAACCCCCGTGCAAATTGCTTATAAGTTGAAAAAGCTAGTTGTTGTGCCAGATACGAATGGTATATTTTTTTCGGAGCAACCTGCTCAAGGGGGATCGGGCGACCCATCGCCCGACAACATTCGGCCAATTCTGCTGAATAACGCAGTGCAAGTAGGCCAGACCAACACCCTGACCCTGCCCGAAACCGTGTATGGCGGTGAGGTGGATGCAGTGAGCGGCAAGGGGCAGAAAGTGTGGAAATCCGTAGCACTGGACGGGACGGAAGAGTGGACCTTACAAACAACCAACATTCCTGGCAAAGTTGGTTTCACGTTTCAAGTGCCTGAAATAGTCACTCCCATGAGTCCCGAAATTAAGGGTGATATTGTATGTAGTCAATATCCGACAATTAGTGCAAATGATACATACCGATGCAAAAACGGAATATCAGTTGAAGCAGGCAACAACCACTATTTCAGAATTTACAATGATACATACGCGGAAGGAACAGTAGACGAGTGGAAGTCTTACCTTGCTACCCAGTACGCCGCAGGCACGCCTGTGCAAGTCTGCTACAAGCTGGCAGAGCCTGTGCCCTTCACCGCAACCGGCGCACAGCCCATCCACGCGCTTGCAGGGGTAAACACTGTGCTGACCGATGCCGACAGCGCGACTGTGACGGGACGAGCAGACCCAATAAAGAGAATCACTGATTTGGAAGATGCAGTAGCATCTCAAACATGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
022e29a123bf69f9dbbf1f9fca07d895c9f73e96e59252044f4e0e655d09801c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50