Protein

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Genbank accession
QBQ74924.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVTRISGNQISTATEAIITTLSFLNTTSKLVLPRGNSDDRPTGVVSGTIRFNTDLDSAEIYVSDTGQGTAGWTDVGGGGPSVGNNSVIRTNPAYIDTSCSVGPANGDEFQNGFTKGPVTINSGVTVTIETNGIWEIF
Physico‐chemical
properties
protein length:138 AA
molecular weight: 14320,54130 Da
isoelectric point:4,29398
aromaticity:0,06522
hydropathy:-0,13478

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM4
[NCBI] 		2530169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ74924.1 [NCBI]
Genbank nucleotide accession
MK493321.1 [NCBI]
CDS location
range 32050 -> 32466
strand +
CDS
ATGTCAGTAACTAGAATTAGTGGAAACCAGATTTCCACCGCAACAGAAGCAATTATCACAACACTAAGTTTTCTAAATACAACTAGTAAACTAGTGTTGCCTCGTGGTAACAGCGATGATCGTCCTACTGGTGTTGTTTCTGGCACGATCAGATTTAATACTGATTTAGATAGTGCTGAGATCTATGTTAGTGATACTGGTCAAGGAACTGCTGGTTGGACTGATGTAGGTGGTGGCGGTCCTTCTGTTGGTAACAACAGTGTTATCAGGACAAATCCAGCATATATCGATACATCTTGCAGTGTTGGACCTGCTAATGGTGATGAATTTCAAAACGGTTTCACTAAAGGACCCGTCACAATTAACAGTGGCGTCACTGTTACTATCGAAACTAATGGTATTTGGGAGATTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2104764cf9c0d8f3f446dd645ff9b34484dfb64a358d6b2e60e04e16162d4c67
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity in Cyanophage Genomes from Southern New England Coastal Waters Marston,M.F. 2013-04-03 — GenBank