Protein

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Genbank accession
WBK39841.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSAPLLEKLKSILVYEESDLAPTAASPRQITVDNSSINTIGSADFAATSNDEFVLNVLEALDGNVKGQLVLIKSINATTDVATTTNFREAPSGLTSCKVWNFNIKGAAVATSAGTTEGQITSTRLTQADDYWNGYKVIGLDTANNYLTMANVTDFAASSDLLTTSFASNSDIGDAYIICQPIQPQGVEISVSGGTVIERDIVTDSLSQEGIIVGTQDEVSINISPEIRGLSNTAGDNETAEPPIEVRPLVQAIMTEGLGTGGVVDTPTNAVYFTADNASIGQYCLGMVNGDVFAKSTVTSALIQTYNGHISTTPVSGDIIHAGACYSPKDTGHSSVGFACMIGDSELAILSGCMPSFGLSLEGNSIARYNFNYLSSGGFWAPYSKTHDDVYDTTAPIAVKSNVSRIVIGGVELDADLMTLSAELLPEPNRKGANFGAFEGSGGYFYTMRQPTITMTIYFENSDYYHMFRAATESDLLVQVGTVPGNTFALWAPRAQIVESPTIGADGELMTQDVSFRLLRPTTAGQPDFVLGIF
Physico‐chemical
properties
protein length:534 AA
molecular weight: 56574,52520 Da
isoelectric point:4,27386
aromaticity:0,08052
hydropathy:0,02378

Domains

Domains [InterPro]
IPR044000
TAS
270–517
IPR044000
IPR044000
TAS
285–517
IPR044000
WBK39841.1
1 534
Architecture
TAS
TAS 270-517 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBK39841.1
1 534
Domain Start End Length (AA) Confidence
N-terminal 1 228 228 0,3568
Central domain 229 427 200 0,1699
C-terminal 428 534 106 0,4031
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-228
Central
229-427
C-terminal
428-534

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacteraceae phage LS06-2018-MD06
[NCBI] 		3003839 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBK39841.1 [NCBI]
Genbank nucleotide accession
OP947162 [NCBI]
CDS location
range 25184 -> 26788
strand -
CDS
ATGAGTGCTCCATTACTTGAAAAACTTAAATCAATACTGGTCTATGAGGAGTCTGACCTAGCGCCAACCGCAGCTTCTCCTCGGCAAATCACCGTAGACAACTCTAGCATCAACACCATCGGCAGCGCAGACTTTGCTGCAACGTCAAACGATGAGTTTGTTCTGAATGTGCTTGAGGCCCTTGATGGAAACGTTAAAGGTCAGCTCGTTCTGATTAAGTCAATAAATGCAACTACAGACGTTGCAACCACTACCAATTTTAGAGAGGCTCCATCTGGTCTTACCAGCTGCAAGGTCTGGAACTTTAACATCAAGGGTGCCGCCGTTGCTACTTCTGCTGGAACCACCGAAGGCCAAATCACGAGTACGCGCCTTACTCAAGCTGACGACTATTGGAACGGCTACAAGGTTATCGGCCTAGACACAGCAAATAACTATCTGACAATGGCCAACGTTACAGACTTTGCTGCATCCAGCGATTTGCTTACTACGAGCTTTGCCAGCAACAGCGATATTGGCGATGCGTATATTATTTGCCAGCCTATTCAGCCGCAGGGAGTTGAAATTTCGGTTTCTGGCGGAACTGTCATCGAGCGAGACATTGTCACTGACAGTCTTTCCCAAGAGGGAATCATCGTTGGCACCCAAGACGAAGTAAGCATCAATATTAGCCCTGAGATTCGTGGACTATCCAATACTGCAGGAGACAACGAAACCGCAGAACCGCCTATTGAGGTAAGGCCGCTTGTTCAGGCTATTATGACTGAGGGGCTTGGCACTGGTGGCGTGGTCGATACTCCAACTAATGCTGTTTATTTTACGGCAGACAACGCAAGCATTGGCCAGTACTGTCTTGGAATGGTAAATGGAGACGTCTTTGCAAAGTCAACTGTTACATCTGCTCTGATTCAGACCTACAATGGGCACATCAGCACAACCCCGGTTTCTGGAGATATAATCCATGCAGGTGCTTGCTACAGCCCGAAAGATACTGGACATTCTAGTGTTGGTTTTGCATGCATGATTGGAGATTCCGAGCTGGCTATCCTGTCTGGTTGTATGCCTTCGTTTGGTCTCAGTCTTGAGGGTAATTCCATTGCTCGCTATAACTTCAACTATCTCTCAAGTGGTGGCTTCTGGGCTCCGTACTCTAAAACCCATGACGATGTTTATGATACCACTGCCCCTATTGCAGTTAAGTCTAATGTCTCTCGCATTGTCATTGGTGGAGTTGAGCTGGATGCTGACCTTATGACGCTTAGCGCTGAGCTGCTTCCTGAGCCAAATCGCAAGGGTGCCAACTTCGGTGCTTTTGAGGGCAGCGGCGGATACTTCTACACTATGCGGCAGCCTACCATTACGATGACCATCTATTTTGAGAATAGCGATTACTACCACATGTTCAGAGCAGCCACTGAGAGTGATTTGCTTGTGCAGGTCGGTACGGTTCCCGGTAATACGTTTGCCCTGTGGGCTCCGCGTGCTCAGATTGTTGAGTCCCCGACCATTGGTGCCGACGGTGAGCTTATGACCCAAGATGTCTCCTTTAGACTGCTGAGACCGACCACGGCAGGACAGCCAGACTTCGTGCTTGGAATCTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
edecc0f4d91c96673f287184ad3d66df6bf280d100c79a7ff6413cdcdf98f808
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7882
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank