Protein

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Genbank accession
WPK37747.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MSIPTTRISELPPSSTLAGTDLLVVEQVDATKKTTLSQLVSDMDISRETMFADDDGASLIGTATGKTVEESIRAASGNSQALFPQLINKLTAYRHGASGQTQFLLYGFGSSVGNGATLPDPATQAPVAKFFEFFNKSINKGGIYPLSFVNRSVNGSTINNFLVDQWPAVVATGTYPDIALFVYGMNDFPTANYNAGQTFNENGFKQRLRAAIRNVRDAGGDVILTTTPHPNIPIYSWSMPPGVAQVWPSPSPAPVSDDSIIPSAAESNVDLVWNGVTITVGHRFLRGNDAIRQIAVEMGCVLIDVEKYWFDALAKYGISSLFNSGQTVHPNLLGHQESYWLAFEEFFANMDKNGWIAPDAGKKDLFEVGGTGSYPNPKEADVDLQSNGVRSYSFVLRDKFSRKIEHVSQVGEVTRWSYTSQEPTTSSPGYNLQWIEYHTRTKGLYAAGDTQLITIPNRTTKKIFIDVWTSAQTSWAQAVELIATNREGVVTYTVIGNHDQTPGTGSTTGGSRLFTLSTVDGTTDGGVVVSITTNNSSLKYRIVGFGT
Physico‐chemical
properties
protein length:547 AA
molecular weight: 59333,58990 Da
isoelectric point:5,37358
aromaticity:0,10055
hydropathy:-0,20676

Domains

Domains [InterPro]
DC_1918
ATT
1–247
DC_1918 DC_1009
IPR036514
STR
106–352
IPR036514
SSF52266
STR
108–344
SSF52266
cd00229
ENZ
108–231
cd00229
WPK37747.1
1 547
Architecture
ATT
STR
RBD
ATT 1-247 | STR 248-352 | RBD 353-547
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV124
[NCBI] 		3077269 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK37747.1 [NCBI]
Genbank nucleotide accession
OR352954.1 [NCBI]
CDS location
range 106002 -> 107645
strand -
CDS
ATGTCAATACCAACCACAAGGATCTCGGAACTTCCTCCATCCTCTACACTTGCAGGGACTGACCTGCTTGTTGTGGAGCAAGTAGATGCTACGAAAAAGACAACCTTAAGTCAACTAGTTTCTGATATGGATATATCCAGAGAAACTATGTTTGCTGATGATGATGGTGCGAGCCTTATAGGGACAGCCACAGGTAAAACAGTTGAGGAATCCATTAGGGCTGCTTCGGGGAATTCACAGGCACTCTTTCCCCAACTTATTAACAAACTAACCGCCTATCGTCATGGTGCCTCTGGGCAGACGCAGTTTCTACTGTACGGATTTGGGTCTTCTGTGGGGAATGGTGCAACATTACCAGATCCTGCCACCCAAGCTCCTGTGGCTAAATTCTTTGAATTCTTTAACAAATCCATTAATAAAGGTGGGATATATCCACTATCCTTTGTAAATAGGTCTGTAAACGGGTCAACGATCAATAATTTTTTGGTTGACCAATGGCCTGCTGTTGTTGCTACTGGGACATATCCAGATATTGCCTTATTCGTGTATGGGATGAATGATTTTCCCACAGCAAACTACAACGCAGGTCAGACTTTCAACGAGAATGGGTTTAAGCAAAGATTAAGAGCTGCAATCAGAAATGTTAGGGATGCAGGTGGTGACGTTATTCTTACTACCACCCCACATCCTAATATCCCCATTTATTCTTGGAGTATGCCTCCGGGTGTCGCCCAAGTATGGCCTTCCCCTTCCCCGGCCCCCGTTTCTGATGATAGTATCATCCCTTCCGCTGCCGAGTCAAATGTAGATTTAGTATGGAATGGTGTGACCATTACGGTGGGCCATCGTTTCTTGCGAGGAAACGATGCTATTCGCCAGATTGCTGTAGAAATGGGTTGTGTTCTTATCGATGTCGAAAAATATTGGTTCGATGCCCTTGCCAAGTATGGCATTAGCTCATTGTTTAACAGTGGGCAAACTGTTCACCCCAACCTTCTGGGGCATCAAGAATCGTATTGGCTTGCATTTGAGGAATTCTTTGCCAACATGGATAAAAATGGATGGATTGCGCCAGATGCTGGCAAAAAAGATCTGTTCGAAGTAGGTGGTACAGGGAGCTACCCAAATCCTAAAGAGGCTGACGTAGACCTCCAAAGCAATGGTGTGAGGTCTTATAGTTTCGTGCTGAGAGATAAGTTTTCAAGAAAAATTGAGCATGTTAGCCAAGTCGGGGAAGTAACAAGATGGTCCTACACCTCTCAAGAACCGACAACTTCCAGTCCGGGTTATAATCTACAATGGATCGAATATCACACTAGGACTAAAGGGCTTTATGCCGCCGGAGATACTCAACTTATCACCATACCGAACCGGACAACCAAGAAAATTTTTATCGATGTTTGGACCTCTGCTCAAACAAGTTGGGCGCAGGCTGTTGAACTGATTGCTACTAACCGGGAAGGGGTGGTCACTTATACGGTTATCGGTAATCATGACCAGACACCAGGAACTGGTTCTACGACAGGTGGTTCAAGACTCTTTACTTTGTCCACAGTAGATGGGACAACCGATGGTGGTGTTGTTGTCTCCATCACAACCAACAACTCATCCTTGAAATATAGAATTGTTGGATTTGGAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f491efa1b979c763c255b7ceef608e4e4f18aca97604949f7b82f375906ad177
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank