Protein

View in Explore
Genbank accession
AMS01280.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSYVIDPTQWGIVEGTDPINATINRDNFIKAIEYAKSEGYYKITLPKGIYMVNGVSNTTTSPEIGAGIRVPGNIEIEITPDTILKVAPNDSYGYTLFYVAPNEKNVSFSGGGYLIGERYDHDYSFQGKDGNKKTHEWGYGIYFHGAHDGYVEKLKIMDFTGDGIFLGAKGLLNYTGSEYHHCYNIHIEKCFISNNRRNNISVTAAEVVRIKNCIITKAGADDGCAPRFGIDIEGYGEGSIDYEEIRDVLIEGCTFIGNINASVSNFNGYGVRIVNNQADHVINYGSGTDTLISNNTMVRTDGKNTAIQGDGVSSSQKCNNALIIGNTIKGFNKGIDARGKGVNIIGNIIDEMHESAVGIVVYYADNVTISGNKVMNENGIAFLVDTSTNISLIGNEAYNSSTRGLDIFRSTDIRIKDFHSIGCYSGIRIRSSEVNFLNILVDFNDIENQSYGIDFDAESQVLFDNITVKKSKNLSILGVATKYRLFMKDIKVLESKYIVPIQITGGMGHRFERIYITTNISGGRGLNLVNTEKVLINDLQAYAATESASMTAPLVSTSSKSTTLANSLYEGKPWMLEDDRQINNIPIAV
Physico‐chemical
properties
protein length:590 AA
molecular weight: 64754,00360 Da
isoelectric point:5,35585
aromaticity:0,09322
hydropathy:-0,21356

Domains

Domains [InterPro]
IPR012334
STR
16–363
IPR012334 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
28–304
IPR011050 IPR039448
IPR039448
ENZ
131–228
IPR039448 IPR006626 IPR006626 IPR006626 IPR022441
IPR006626
Unmapped
147–169
IPR006626 IPR006626 IPR006626 IPR011050
DC_0453
RBD
373–586
DC_0453
AMS01280.1
1 590
Architecture
STR
RBD
STR 16-472 | RBD 473-586 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMS01280.1
1 590
Domain Start End Length (AA) Confidence
N-terminal 1 19 19 0,9368
Central domain 20 579 561 0,9951
C-terminal 580 590 10 0,2963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-19
Central
20-579
C-terminal
580-590

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage AR9
[NCBI] 		1815509 Uroviricota > Caudoviricetes > Takahashivirus >
Host Bacillus subtilis subsp. subtilis str. 168
[NCBI] 		224308 Bacillota > Bacilli > Bacillales > Bacillaceae > Bacillus > Bacillus subtilis subsp. subtilis str. 168

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
dc454651d78975b769cafef2b7ab62d7f96dcd37159c112037d5d436250345d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8667
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50