Protein

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Genbank accession
WGG14606.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDVQTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAVNFSNTLTEANFFEWLGFDRKGNTFLLPLYSNNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVMSYSPAVASTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPLARITKRLNFSDVYKIEWDIIPTASSDPVRIDFFGEIKND
Physico‐chemical
properties
protein length:300 AA
molecular weight: 34442,33140 Da
isoelectric point:4,98611
aromaticity:0,13333
hydropathy:-0,25033

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
WGG14606.1
1 300
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGG14606.1
1 300
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,5937
Central domain 288 289 3 0,7793
C-terminal 290 300 10 0,7291
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-289
C-terminal
290-300

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phC11
[NCBI] 		3038309 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGG14606.1 [NCBI]
Genbank nucleotide accession
OQ680480.1 [NCBI]
CDS location
range 94788 -> 95690
strand +
CDS
ATGTACTACTCTCTAATGCGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATGTACAAACCTCCTACGAAGAATTTAAGACTCTTCGTAGGACTATTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACTCCCTCTTCTATCTCTCTAGCAGTAAATTTTAGTAATACGCTTACTGAAGCTAATTTTTTCGAATGGCTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTACCACTATATAGTAACAATATTGAACCTATTATGTTTAATATCTATATAGTAAATAAAGATAATAACTGTGTATACTTTGAGAACTGCTATGTATCTACTGTAGATTTTTCTTTAGATAAGAATATACCAATTCTTAATGTTGGTATTGAATCGGGGAAATTTTCCGAAGTATCTACATATAGAGAAGCAGCTTCTATTATACAGGGTGAAGTAATGTCTTATAGCCCAGCAGTAGCTTCTACTAATGGTAGCATCTTACCAGGTCTTATCTCTGCCTCTTTATCTTTCCAGCAGCAGTGCTCTTGGAGAGAAGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCTTATGTAAATGAAATGAATGCTTCGGCAACCATTTCTCTATATTACTTAAAACGTTTTGCAGGAGATATGGTTTACAATATCGAACCGGAGACAGATGTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTTAGCACGTATTACAAAACGCCTAAATTTCTCAGATGTGTATAAAATTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCTGTGAGAATAGATTTCTTTGGAGAAATTAAAAATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
183287c1e72c65e3fba81099a6bbd3efb163e1c3a4185bb4988619aa3925d3a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8101
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of effectiveness for phage cocktail development against multiple Salmonella serovars and its biofilm control activity Ribeiro,J.M., Pereira,G.N., Durli,I., Teixeira,G.M., Bertozzi,M.M., Verri,W.A., Kobayashi,R.K.T. and Nakazato,G. — — GenBank