Protein

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Genbank accession
AUR94646.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADSLMMAESSHSIYVNRLASQEVNKLNEFWGGYLRLLQNALGGYDSAMTQRQLNKLIKDVDGVITANMEEWQHQLTLDLDEFAEYETDFQARMIGAVTDQDIAVPASSQVIAAAIANPIQTGAGAIQFEQWLTNVSTQQRQRIEGEIKLGYANGVPTNTIVQRIVGTRANKFTDGIADTDRRSAVTLVRTSTSHYANEARKQVYRENKRVVIGHRWVSTLDKRTSNICRNRDGDVYIYADDKPVYYPPAHANCLLGDTNVTTSAAVANIYERTFKGTMIQITCESGRNITITPNHPILTNRGWVKAAEVDKFDKLIAMSETTLVKHEEYGISSKFEDMSSAFDVPVNSGFVGSRPTTTKDFHGDGIANGYVNIVDVHGFRRNTLDTTAAKEVDNSGFMERAGVNNAFNGFGSLNLLFSAALSSLNRAVSCRGKASDLFWGASIHPSFLLLRSISERAVNRLKVSNYWCSAAAKAEFANNALCANARLVSSADSSLFGVGKFDSLGEGNLDTCIGEGSLDWFFSNAEELANLTAANLVDGVELDNVVDLTLREFDSVHVYNLENDVNWYTSNGIITHNCRSSTSPVIKGYNFSNPNGKRSSKGGKLVDGELKQDPKQVSATQTYYDWLKNQPAQFQDEVLGKTKGKIFRNSGVSVEKFKTLMIDRMNKPMTIDQMAAKDQQIADYLKSLK
Physico‐chemical
properties
protein length:690 AA
molecular weight: 76228,61230 Da
isoelectric point:6,12005
aromaticity:0,08551
hydropathy:-0,35406

Domains

Domains [InterPro]
DC_1147
ATT
1–147
DC_1147 G3DSA:2.170.16.10 IPR030934
IPR006528
RBD
130–254
IPR006528 IPR006141 DC_0892
IPR006528
RBD
136–254
IPR006528 IPR006141
G3DSA:2.170.16.10
RBD
224–350
G3DSA:2.170.16.10
IPR036844
STR
244–579
IPR036844
IPR003587
STR
252–320
IPR003587
cd00081
RBD
267–317
cd00081
AUR94646.1
1 690
Architecture
ATT
RBD
STR
RBD
ATT 1-147 | RBD 148-243 | STR 244-579 | RBD 580-690
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR94646.1
1 690
Domain Start End Length (AA) Confidence
N-terminal 1 262 262 0,8863
Central domain 263 461 200 0,8068
C-terminal 462 690 228 0,4705
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-262
Central
263-461
C-terminal
462-690

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.197.A._10N.286.54.F2
[NCBI] 		1881256 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR94646.1 [NCBI]
Genbank nucleotide accession
MG592566 [NCBI]
CDS location
range 4560 -> 6632
strand +
CDS
ATGGCTGACAGCTTAATGATGGCTGAATCTTCACACAGTATCTACGTGAATAGACTCGCATCGCAAGAGGTAAATAAACTTAATGAATTTTGGGGTGGTTACTTGCGACTACTCCAGAATGCGCTTGGTGGCTACGATAGCGCAATGACGCAGCGACAGCTCAATAAGCTAATCAAAGATGTTGACGGCGTTATCACTGCGAATATGGAAGAGTGGCAGCATCAATTAACACTAGACCTTGATGAGTTTGCAGAATACGAAACAGACTTCCAGGCGCGTATGATTGGCGCTGTGACAGACCAAGATATTGCTGTCCCTGCATCATCTCAAGTTATCGCTGCTGCAATCGCCAATCCCATTCAAACTGGTGCGGGCGCTATTCAATTCGAGCAATGGCTGACCAACGTATCAACACAACAACGACAAAGAATCGAAGGTGAGATTAAACTTGGATATGCTAACGGTGTGCCGACTAATACCATTGTTCAGCGCATTGTAGGAACTCGCGCAAACAAGTTCACTGATGGGATTGCGGATACTGATAGACGTAGCGCTGTGACACTGGTTAGAACGTCAACAAGTCATTACGCCAATGAAGCGCGTAAACAGGTATACAGAGAAAACAAGCGCGTTGTTATTGGTCACAGGTGGGTATCTACATTAGATAAGCGCACAAGTAATATCTGCCGAAACCGTGACGGTGATGTGTATATTTATGCTGATGACAAGCCAGTTTACTACCCGCCAGCACATGCTAACTGTTTACTTGGAGACACTAACGTAACGACCAGTGCTGCAGTCGCGAACATTTATGAACGGACATTCAAAGGAACTATGATCCAAATCACTTGTGAATCCGGTCGTAATATCACCATTACCCCAAACCATCCAATACTTACCAACAGGGGTTGGGTTAAGGCTGCAGAGGTTGATAAGTTCGATAAGCTTATCGCCATGAGTGAAACCACGCTTGTCAAACATGAGGAATATGGTATCTCTTCCAAGTTCGAAGATATGTCTAGTGCGTTCGATGTACCTGTTAATTCTGGCTTCGTCGGTTCTAGACCAACCACCACCAAAGACTTCCACGGCGACGGTATCGCCAACGGCTATGTCAACATTGTAGATGTGCATGGCTTTAGACGGAACACACTCGATACCACTGCAGCGAAGGAAGTCGACAACAGTGGATTCATGGAGAGAGCTGGGGTTAACAACGCCTTCAATGGTTTTGGCTCTCTTAATCTTCTCTTCAGTGCTGCGCTTTCTTCCCTTAACCGCGCTGTGAGCTGCAGAGGTAAGGCGAGCGATTTGTTCTGGGGTGCTTCTATCCATCCTAGCTTTTTGCTGTTGAGATCTATTTCTGAGCGTGCCGTAAATAGACTTAAGGTATCTAATTACTGGTGCAGCGCTGCAGCTAAGGCCGAGTTCGCCAACAATGCCCTTTGCGCCAATGCCAGACTCGTAAGCTCTGCAGATAGCAGCCTTTTCGGAGTCGGTAAATTTGACAGCCTTGGTGAAGGAAATCTCGATACCTGCATTGGTGAGGGCTCTCTGGACTGGTTTTTCTCCAACGCCGAAGAGCTTGCCAATCTTACTGCAGCCAATCTTGTCGATGGTGTAGAGCTTGATAATGTCGTCGATTTGACTTTGCGTGAATTCGATTCTGTTCATGTTTATAACCTCGAAAATGATGTTAATTGGTATACGTCGAATGGCATTATAACACACAACTGCCGTAGTTCAACGTCTCCAGTAATTAAGGGTTACAACTTTAGCAACCCAAACGGTAAACGCTCATCTAAAGGCGGCAAGCTTGTCGATGGTGAGCTAAAACAAGACCCGAAACAAGTGAGCGCAACGCAGACATATTACGATTGGCTTAAGAATCAACCCGCTCAATTCCAAGATGAGGTGTTAGGAAAAACAAAAGGCAAGATATTCCGTAACTCAGGAGTTTCGGTCGAGAAGTTCAAAACCCTGATGATTGACCGTATGAATAAGCCTATGACTATCGACCAAATGGCAGCGAAAGACCAACAGATAGCTGATTACTTGAAGTCATTGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc9802f356d4d62f052032c83e59356177f08f03aa9724ea34fc94feda7c4720
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6300
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank