Protein

Genbank accession
WRQ13382.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVVLSGYKVIYDKETQRAYSLPAGIASGTTAISLSTAAVLVHSAGSVDLGALAVSMEEYVTLPGSFDSGSTLNVKNELLTHTDGKYRWDGAFPKTVAAGSTPMTTGGVGIGAWLSVGDAAFRQEANKKFKYSVKLSDYSTLQDAATAAVDGLLIDINYNFTDGESVDFGGKILTINCKAKFIGDGALIFNNMGPGSVINQPFMESKTTPWVIFPWDADGKWITDAALVAATLKQSKIEGYQPGVNDWVKFPGLEALLPQNVKDQHITATLDIRSASRVEIRNAGGLMAAYLFRSCHHCKVIDSDSIIGGKDGIITFENLSGDWGLGNYVIGGRVHYGSGSGVQFLRNNGGESHNGGVIGVTSWRAGESGFKTYQGSVGGGTARNYNLQFRDSVALSPVWNGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLVMDGRGGYVSNVTVQDCAGAGMLAHTYNRVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIKAAGIKPQPSNGLVISAPNSTISGLVGNVPPDKILVGNLLDPVLGQSRVIGFNSDTAELALRINKLSATLDSGALRSHLNGSAGSGSAWTELTALSGSTPNAVSLKVNRGDYKTTELPISGTVLPDEGVLDINTMSLYLDAGALWALIRLPDGSKTRMKLSV
Physico‐chemical
properties
protein length:709 AA
molecular weight: 74884,67340 Da
isoelectric point:5,60259
aromaticity:0,07898
hydropathy:-0,01890

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012332
IPR040775
91–156
IPR040775 IPR011050
IPR015331
162–707
IPR015331
WRQ13382.1
1 709
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAc-pSK20
[NCBI] 		3093916 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WRQ13382.1 [NCBI]
Genbank nucleotide accession
OR729889.1 [NCBI]
CDS location
range 138167 -> 140296
strand -
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCGACTGGAATCTTAACCAATAAACAAGCAGTAGCCAGACACTTTGGTGTTAAACAATCTGAGGTTGTTTACTTTTCGGTTGGTGTAGTTTTAAGTGGGTATAAGGTTATCTATGACAAGGAAACGCAAAGAGCTTATTCCCTACCTGCTGGTATTGCTTCTGGTACTACTGCCATCAGTCTTAGTACTGCTGCTGTACTTGTACATTCAGCAGGTTCTGTAGACTTAGGTGCACTAGCTGTATCTATGGAAGAATACGTAACCTTACCCGGTTCATTTGATTCTGGTTCTACGCTTAACGTTAAAAATGAATTACTTACACATACTGATGGTAAGTATCGCTGGGACGGAGCATTTCCTAAAACTGTAGCTGCTGGCTCAACTCCGATGACAACTGGCGGGGTTGGCATTGGTGCATGGTTGAGTGTTGGTGACGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAGTTATCTGATTATTCTACATTACAGGATGCAGCGACAGCAGCCGTAGATGGATTGCTTATTGATATCAATTACAACTTCACAGATGGTGAGTCTGTAGATTTTGGTGGTAAGATTTTAACCATTAACTGTAAGGCTAAGTTTATTGGAGATGGGGCTTTAATATTTAATAATATGGGGCCAGGCTCGGTAATTAATCAACCATTCATGGAGAGCAAGACTACTCCATGGGTCATTTTCCCGTGGGATGCTGATGGTAAATGGATTACAGATGCTGCCCTTGTTGCTGCAACGCTGAAGCAATCAAAGATTGAAGGCTATCAACCTGGGGTAAATGACTGGGTTAAATTCCCTGGATTAGAGGCATTACTCCCACAGAACGTTAAAGACCAACATATTACAGCCACTCTAGATATTCGCAGTGCCAGCCGAGTAGAAATAAGAAATGCTGGTGGTCTTATGGCTGCTTACCTTTTCCGTAGTTGTCATCACTGCAAGGTAATTGATTCAGATAGCATCATTGGTGGTAAAGATGGAATCATTACCTTTGAGAACCTTAGTGGTGATTGGGGATTAGGTAATTATGTTATTGGTGGACGTGTTCATTATGGTTCTGGTAGTGGTGTTCAGTTCCTGAGAAATAATGGTGGTGAATCCCACAATGGTGGAGTTATTGGTGTTACATCATGGCGAGCTGGTGAGTCTGGTTTCAAGACTTATCAGGGTTCCGTTGGTGGTGGTACTGCACGTAACTATAATCTACAGTTCAGGGATTCTGTTGCATTGTCTCCTGTTTGGAATGGTTTTGACTTGGGTTCTGACCCAGGTATGGCACCAGAACCGGATAGACCTGGGGATTTACCTGTATCTGAATATCCATTCCACCAACTGCCTAATAACCATTTGGTTGATAATATTCTTGTTATGAACTCACTTGGTGTTGGTTTAGTTATGGATGGTCGTGGTGGGTATGTTTCTAATGTTACCGTACAGGATTGTGCTGGTGCAGGTATGCTTGCACATACTTACAACCGTGTATTTTCTAACATTACAGTTATTGATTGTAACTACCTTAATTTTGATTCTGACCAAATTATCATTATAGGTGATTGTATTGTTAATGGGATTAAGGCTGCTGGGATTAAACCACAACCATCAAATGGTCTGGTTATCAGTGCACCAAACTCCACAATAAGTGGGTTGGTCGGTAATGTTCCTCCAGATAAAATTCTTGTTGGTAACTTACTTGACCCAGTATTAGGTCAGTCTAGAGTCATCGGGTTCAATAGTGATACTGCTGAGTTGGCTCTACGTATTAACAAGCTGTCAGCTACTCTGGATAGTGGTGCTTTACGTTCCCATCTGAACGGTTCTGCTGGTTCTGGTTCAGCATGGACTGAGTTAACTGCACTCTCTGGTTCAACCCCTAATGCTGTATCTCTCAAGGTTAACCGAGGAGATTATAAGACAACTGAGCTACCTATTTCTGGTACAGTATTACCGGATGAAGGTGTGTTGGATATTAATACAATGTCCTTGTACTTAGATGCGGGTGCACTGTGGGCTTTGATACGACTCCCTGATGGAAGTAAAACACGTATGAAGTTATCTGTGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
12a3cd3abe1cdc463083ff77797c765cc40d869b7a28b03368ee92e68e3725ec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6866
Evidence 0,6866
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella virus vB_SenAc-pSK1 Kim,Y., Park,S.Y. and Kim,J.H. 2012-09-15 — GenBank