Protein

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Genbank accession
ANY92516.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MTLLDAINISLTAIGEYRITSDTVRNPTIGIVKDTLETKRKLLLSDGWWFNEREMTLYPDVEGHIYLPSTTIDIYDAASDVMYGEDENGLLLDYATNNIVFDESKLLRIVFDTPFEHMPEMAQQIVAYEAAMQVYANDLGVDNQYQNLDRQAQEAFRVLHKQNLRNRRYSTSKTGRYRRIRSALYT
Physico‐chemical
properties
protein length:186 AA
molecular weight: 21573,05770 Da
isoelectric point:4,98742
aromaticity:0,10215
hydropathy:-0,43978

Domains

Domains [InterPro]
IPR033767
TTP
4–169
IPR033767
IPR033767
TTP
4–165
IPR033767
ANY92516.1
1 186
Architecture
TTP
TTP 4-169 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP48
[NCBI] 		1874018 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANY92516.1 [NCBI]
Genbank nucleotide accession
KX371615.1 [NCBI]
CDS location
range 18022 -> 18582
strand -
CDS
ATGACCTTACTAGATGCAATCAATATCTCGTTGACTGCGATTGGTGAGTACCGCATCACATCCGACACTGTTCGCAACCCTACCATTGGTATCGTCAAGGACACTCTTGAAACTAAACGCAAACTATTGCTGAGCGATGGTTGGTGGTTCAACGAGCGTGAAATGACGCTATACCCTGATGTCGAGGGGCATATCTACCTACCTAGTACAACCATCGACATTTACGATGCGGCTAGTGATGTGATGTATGGTGAGGATGAGAACGGCTTACTGTTGGATTACGCCACCAATAACATTGTATTCGATGAGTCCAAGCTATTGCGTATCGTGTTTGATACACCGTTCGAACACATGCCAGAAATGGCACAACAAATCGTCGCATATGAAGCGGCTATGCAAGTTTATGCGAATGACTTAGGTGTGGACAACCAGTACCAGAACCTAGACCGTCAGGCGCAAGAGGCGTTCCGAGTGCTGCACAAGCAGAACCTACGTAACCGCCGCTACAGTACAAGCAAGACAGGGCGTTACCGTCGTATCCGCTCTGCACTATATACATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0f941bb5327e450770204aa2e1aacbb52de3376942a5096a8ccd60bfed10b6cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9361
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of Vibrio parahaemolyticus phage VP48 isolated from sea water Qiao,H., Xu,X.L., Fei,W.B., Huang,J., Cong,Y., Fu,Y.M., Zhou,S.X., Mandeville,R., Wang,W.B. and Sheng,C.J. 2019-06-06 — GenBank