Protein

View in Explore
Genbank accession
YP_010088283.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAATVRFNGGVHVPTVGSSQQCGVYPGNGDAATFAMANIDIVSWNGIGFKSSQGSADRTVVINARNGDISTKGVVTAVGQIRSNAVAPVAVNDLTRKDYVDGRINTVMDNANSRVLRSGDTMTGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23354,64470 Da
isoelectric point:6,26470
aromaticity:0,09091
hydropathy:-0,25636

Domains

Domains [InterPro]
DC_0466
STR
1–218
DC_0466
IPR005601
STR
56–194
IPR005601
YP_010088283.1
1 220
Architecture
STR
STR 1-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010088283.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,9695
Central domain 34 209 177 0,1290
C-terminal 210 220 10 0,9238
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage ATK47
[NCBI] 		1651196 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010088283.1 [NCBI]
Genbank nucleotide accession
NC_055708 [NCBI]
CDS location
range 16920 -> 17582
strand -
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCCGTTATATGGCACCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCAAATGGTGGTACTTACGCTGCAACTGTTCGATTTAATGGAGGCGTACATGTTCCTACTGTAGGTAGTAGTCAACAGTGCGGTGTTTATCCAGGTAACGGTGATGCAGCTACTTTTGCTATGGCAAATATTGACATCGTTTCGTGGAATGGTATTGGTTTTAAATCATCACAAGGTTCGGCAGACCGAACTGTTGTAATTAATGCACGTAATGGTGATATTAGTACAAAAGGCGTTGTGACAGCAGTAGGTCAAATAAGAAGTAATGCAGTTGCTCCAGTTGCAGTTAATGATCTCACAAGAAAAGATTATGTTGATGGACGAATAAATACTGTTATGGATAACGCAAATTCCCGTGTATTGCGTTCTGGCGATACCATGACTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCGTCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9707316697b98c8b2cc3ee6301a81d39c8b01a1dd9b6794f24c0e61da89af287
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6985
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of nine bacteriophages able to infect non-O157 STEC Farrokhzad,K., Applegate,B.M. and Zhang,J. 2017-12 — GenBank