Protein

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Genbank accession
ARB06986.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MKKILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDILYNGILYQAGKVKSISTHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRTVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRFTDDASHRGLEVVAGQLVPSNGAKRLEYQEDYGFFHSNKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICIDSNDSSARTCFGVKKVAGDTMQRIASGISSSSPSVHGQEYKYNDGNGDIRIWTYHGKSDQTASEVLVDIAKERGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKVKVYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRVTVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNSITFYNSKYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWNKKYFLVDEVENSREGKINVTLQEYGEDVFINSDQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIHDSQNRMLRSVRIENQYTYDYLLTYNKADFALQNSGALGINRKLYFRIRAEGDDGEQSVEWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 106949,11890 Da
isoelectric point:5,19374
aromaticity:0,11170
hydropathy:-0,41770

Domains

Domains [InterPro]
DC_0187
STR
229–948
DC_0187
IPR032876
ATT
595–697
IPR032876
ARB06986.1
1 949
Architecture
STR
ATT
STR
STR 229-594 | ATT 595-697 | STR 698-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB06986.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9345
Central domain 313 526 215 0,4223
C-terminal 527 949 422 0,0038
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-526
C-terminal
527-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiLLS
[NCBI] 		1965465 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus LLS
Host Escherichia coli O157
[NCBI] 		1045010 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB06986.1 [NCBI]
Genbank nucleotide accession
KY677846.1 [NCBI]
CDS location
range 101928 -> 104777
strand +
CDS
ATGAAAAAAATACTAGATAGTGCTAGAAACTACTTAAAAAATAATAGCAGAATAAAAACTGCTAGTCTAATTTCTCTAGAGTTACCTGGCTCTACTGGTACTAGTACTGCTTTTATTTATTTAACTGATTATTTTAGGGATATACTATATAATGGCATCCTATACCAGGCGGGTAAAGTTAAGTCTATTAGCACACACAAACAAAATAGAGATTTATCTATTGGTAGTCTATCTTTTACTATTACTGGTACAGCACAGGATGAAGTACTAAAACTAGTACAAAATGGTGTATCCTTCTTAGATAGAACCGTATCAATTCATCAAGCAATTATTACCGAAGATGGTTCTATTCTACCAGTAGACCCAGATACAAATGGTCCTTTACTATATTTTAGGGGGAGGATTACTGGAGGTGGCATTAAAGATAACATTAGTACCTCTGGAGTAGGGACCTCTACAATTACCTGGAATTGTTCTAACCAATTCTATGACTTTGATAGAGTTAATGGTAGATTTACTGATGATGCTTCTCATAGAGGACTTGAGGTTGTAGCGGGACAATTAGTTCCATCTAACGGGGCTAAAAGACTTGAGTACCAAGAAGACTATGGGTTCTTCCACTCTAATAAAAGTATCTCTATCCTAGCAAAGTACCAAGTACAGGAAGAAAGGTATAAGCTAAAATCAAAGAAAAAACTATTTGGCTTATCTAGAAGCTACAGCCTTAAAAAATACTATGAAACTGTCACTAAGGAAGTAGATATAGATTTTAACCTTGCTGCTAAATATATCCCAGTAGTTTATGGCGTACAGAAAATACCAGGAATACCAATTTTTGCTGATACAGAACTGCACAATCCCAACATAGTTTATGTCGTATACGCCTTTGCTGAGGGGGAGATTGATGGTTTTCTTGATTTCTCCTTTGGTGATAACCCCATGATTTGTATAGATTCTAATGATAGCTCTGCTAGAACCTGCTTCGGTGTTAAAAAAGTAGCCGGAGACACCATGCAAAGAATAGCATCAGGAATATCTTCTAGTAGTCCTTCTGTGCATGGTCAGGAATATAAATATAATGATGGTAATGGTGATATAAGGATTTGGACGTATCACGGAAAATCTGATCAAACGGCTTCTGAAGTATTAGTAGATATAGCTAAAGAACGTGGGTTCTACCTTCAGAATATGAATGGCAATGGACCTGAGTACTGGGATGCTAGATATAAACTACTAGATACTGCATACGCAGTGGTGCGCTTCACTATTAATGAAAATAGGACTGAGATTCCTGAAGTTAGTGCTGAAATTCAAGGTAAAAAAGTAAAAGTCTATCATTCTGATGGTAGAGTAACTGCTAATAGTACTAGTTTAAATGGTATTTGGCAAACACTTGATTACTTAACCTCTGATAGATATGGCGCTAATATTACCATTGATCAGTTCCCCCTTCAGCAACTAATACAGGAAGCAGCTATTTTAGATATTATAGATGAATCCTATCAGGTATCTTGGCAGCCATATTGGAGATACGTTGGATGGACTGATCCACTAGCAGAAAATAGACAAATAGTACAAATGAATACTATTCTGGATACATCTGAATCAGTATTTAAAAATGTGCAAGGTTTGTTAGAGTCCTATGGTGGGGCTATTAACAACTTATCTGGCCAGTACAGGGTTACTGTAGAAAAATACTCTAATACTCCATTAGAGATTAATTTTCTAGATACTTATGGTGATTTGGAGCTATCAGATACTACTGGTAGAAATAAATTCAACTCAGTTCAAGCATCTATCGTAGACCCAGCCCTTAGCTGGAAAACTAATTCCATTACATTCTATAACTCCAAGTATAAGGAACAAGACAAGAACCTGGATAAAAAACTACAACTATCTTTTGCTAATATTACTAATTATTATACTGCAAGAAGTTTTGCTGATAGGGAACTTAAGAAATCTAGATACTCAAGAACACTTTCTTTCTCATTGCCATATCAATTCATTGGTATTGAGCCTAATGATGCTATTGCATTCACGTATGATCGTTATGGATGGAACAAAAAGTATTTCCTAGTTGATGAGGTTGAAAATTCTAGAGAAGGAAAGATAAATGTTACTCTACAGGAATACGGGGAAGATGTATTTATCAACTCTGATCAAGTAGATAATAGTGGTAATGATATACCAGATATTAGTAACAACGTTCTTCCTCCTAGAGATTTTAAGTATACTCCTACACCCGGTGGCTTAGTTGGTTCTATAGGAAAAAATGGTGAGTTATCTTGGCTCCCAAGCTTAACTAATAACGTAGTTTATTACTCTATCGTGCATTCCGGTCATGCTGAACCTTACATAGTACAACAGTTAGAGACCAATCCTAACGAACGTATGATCCAAGAAATAATTGGGGAACCAGCAGGCCTGGCTATATTTGAGATAAGGGCAGTAGATATTAATGGTAGAAGAAGTTCTCCAGTAACATTATCCATAGAACTTAACTCTGCTAAAAACCTAAGCGTAGTATCTAATTTTAGAGTAACTAATACAGCCTCTGGGGATGTAACTGAGTTTGTAGGCCCAGATGTGAAACTAGCCTGGGATAGAATACCTGAAGAAGATATAATAGAGAGTATATTTTATACCCTTGAAATACACGATTCGCAAAATAGGATGTTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAACATATAATAAGGCAGACTTTGCTCTCCAGAACAGCGGTGCTCTAGGAATCAATAGAAAATTGTATTTTCGTATTAGGGCAGAAGGGGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b843f0903da9a5cce356a8a0d814419aaed12c58767e2ca6fcf6d8303d52513c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8148
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of new bacteriophage phiLLS Rubi-Rangel,L., Amarillas,L., Carrillo,H. and Leon-Felix,J. 2013-05-17 — GenBank