Protein

Genbank accession
UXL90907.1 [GenBank]
Protein name
baseplate upper protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKNYVEKIGMCGVNPCSPMSIYQWDGLTWQELINNVFKGVNDCVSVVNNYTDLVSNTIEWIKTDGLKIYVENKINGLIEDGTISEIINGEIFSQINDDISNIKENVNSNKEFTKEQIKQVENKIIDLGKKIDDKILKLSDELKNNLEEHKEAINIKIEDLGTEFNNGLSEIKKALAIQKGVLVYLNEYSEIAKAGTDEEDWSLAFDYVFKNVVNETVASIIWNGRLKIKSTIHLPKHVNISGIGLPWSGLIPLNNFKGDYVIEDNNEPTHNSIKNIYFDFAENKTVKGLKVLNPYDYNEYKFLVADGIGDTFISIGGSEISQSARIEDCVAYRENRGLGAIMELRNCQEFYVVNNKLLFKTQSNKECLWCDGVTNTTFIHNSFAFTNEVAVKMLANHYPKRLNGNVFTDNLFEGIGAGGCITILGSNNPDLEGSYNSIHDNSYFSSTAIINLGSIANTFISDPVKINHLGGDRRTYLFNRYHETSKTPYGSVEEWCDGAYKMTKSWFKIIPTQEGEPSYLYMTDKAGKERMITISADGQLEIV
Physico‐chemical
properties
protein length:543 AA
molecular weight: 61213,39010 Da
isoelectric point:5,03022
aromaticity:0,09945
hydropathy:-0,34438

Domains

Domains [InterPro]
G3DSA:1.20.120.20
63–192
G3DSA:1.20.120.20 IPR011050
Coil
103–130
Coil Coil
UXL90907.1
1 543
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage DCp1
[NCBI] 		2981543 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXL90907.1 [NCBI]
Genbank nucleotide accession
OP256049 [NCBI]
CDS location
range 2215 -> 3846
strand +
CDS
TTGAAAAATTATGTTGAAAAAATAGGGATGTGTGGAGTAAATCCATGCTCCCCTATGTCAATTTATCAATGGGATGGGTTGACATGGCAAGAATTAATTAATAATGTTTTTAAAGGTGTAAATGATTGTGTATCAGTTGTTAATAATTATACTGATTTAGTTTCAAATACCATTGAATGGATAAAAACAGATGGTTTAAAAATATATGTTGAAAATAAAATAAATGGATTAATAGAAGATGGTACAATTAGTGAAATAATTAACGGGGAAATTTTTTCTCAAATAAATGATGATATTTCCAATATAAAAGAAAATGTTAACAGTAATAAAGAGTTTACAAAAGAACAAATAAAACAAGTTGAAAATAAAATTATAGATTTAGGTAAAAAAATTGATGATAAAATTTTAAAATTAAGTGATGAATTAAAAAATAATTTAGAGGAACATAAAGAAGCAATTAACATTAAAATTGAAGATTTAGGGACAGAATTTAATAATGGATTATCTGAAATTAAAAAAGCCTTAGCAATTCAAAAAGGTGTTTTAGTTTATTTAAACGAATATTCTGAAATAGCAAAAGCTGGGACAGATGAAGAAGATTGGTCACTTGCCTTTGATTATGTTTTTAAAAACGTTGTTAATGAAACAGTAGCGTCAATTATATGGAATGGGAGATTAAAAATTAAATCAACAATTCATTTACCTAAACACGTAAATATTAGCGGTATAGGTTTACCGTGGAGTGGTTTAATTCCTCTAAATAATTTTAAAGGGGATTATGTTATTGAGGATAATAATGAACCTACTCACAATTCAATTAAAAATATTTACTTTGATTTTGCTGAAAATAAAACTGTCAAGGGTTTAAAAGTTTTAAATCCTTACGATTATAATGAATATAAATTTTTAGTTGCTGATGGTATTGGAGATACTTTTATTAGTATTGGAGGTTCAGAAATATCTCAATCTGCCCGAATAGAGGATTGTGTTGCTTATAGAGAAAATAGGGGTTTAGGGGCTATAATGGAACTTAGAAATTGTCAGGAATTTTATGTAGTGAATAACAAGTTATTATTTAAAACTCAATCAAATAAAGAATGTTTATGGTGTGATGGTGTTACAAATACAACATTTATACACAATAGTTTTGCTTTTACTAATGAAGTAGCTGTAAAAATGTTAGCTAATCATTATCCTAAAAGACTTAACGGTAATGTATTTACAGATAATTTATTTGAAGGAATAGGAGCGGGTGGTTGTATAACAATATTAGGTTCTAATAATCCTGATTTAGAGGGAAGTTATAACAGTATTCACGATAACTCTTATTTTAGTTCTACAGCTATAATTAATTTAGGTTCAATAGCAAATACCTTTATATCTGACCCAGTAAAAATTAATCATTTAGGAGGTGATAGAAGAACTTATTTATTTAATAGGTATCATGAAACATCAAAAACTCCTTATGGCTCAGTAGAAGAATGGTGTGATGGGGCTTATAAAATGACTAAATCATGGTTTAAAATAATTCCTACTCAAGAAGGAGAACCATCATATTTATATATGACAGATAAAGCTGGTAAAGAAAGGATGATTACAATATCAGCAGATGGACAATTAGAAATTGTATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
66a45549f839f30d48b94efac3a933cac8b824035fb291f591e9126400870105
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7297
Evidence 0,7297
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Clostridium perfringens phage DCp1 Tang,Z. 2023-02-20 — GenBank