Protein

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Genbank accession
XPP59544.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALERHEVKNPVGLNTDIAPADLPLTEWSSGNNIRFKNGKAQRALGHQTIFDSEFSVIQLFPYIKNNIPYWLLATKEKIYAADGTVILDVSPGLTFHADEANNWIGSSLNGAIIMNNPVDGPYAMAPELGNFQALPNWPANTQCKVMRPYKNYLIALNITKNSVEMPQLVKWSSPADPGGVPGTWDETDPKNDAGENPLADTNGKIVDGKKLRDAFIIYKEDSVYSMRYIGGVYVFQFQQLFDDVGMLGPNCAVEFDGKHFVVGQGDIYVHNGVEKKSVIDGKMRRFFFNDINSENYRKTFVVSDTVNTEMWVCYSSTKMGEGAFCDRALVWNWSEDTWSMRDMPNVISGDYGIIDPKESNLWDDDMDPWDSDTTVWGAGSYNPSKRKLIFTSNVDKKMYLFGESSTFSGQPFQSFLERTDMYLGEDRMMKTMSSIIPHISGNGSCNVYVGAAQIQGGAIRWKGPIPYRIGTDYKIDCKHVGRYVAVRFEFDSTGDWAFNGYTAEYAPNAGMR
Physico‐chemical
properties
protein length:513 AA
molecular weight: 57585,21400 Da
isoelectric point:5,08086
aromaticity:0,12281
hydropathy:-0,40351

Domains

Domains [InterPro]
DC_0191
STR
8–513
DC_0191
XPP59544.1
1 513
Architecture
STR
STR 8-513
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP59544.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 372 372 0,6788
Central domain 373 502 131 0,1681
C-terminal 503 513 10 0,9940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-372
Central
373-502
C-terminal
503-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Rembedalsseter
[NCBI] 		3374954 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP59544.1 [NCBI]
Genbank nucleotide accession
PQ464593 [NCBI]
CDS location
range 34305 -> 35846
strand -
CDS
ATGGCCCTTGAAAGACATGAGGTGAAGAACCCTGTTGGGTTGAACACCGACATTGCCCCTGCTGACCTGCCGTTGACGGAGTGGTCCTCTGGGAACAACATCCGTTTCAAGAATGGCAAGGCTCAAAGGGCACTGGGCCATCAAACCATCTTCGATTCGGAATTCTCTGTAATCCAATTGTTTCCGTACATCAAGAACAACATCCCCTACTGGCTCCTGGCCACCAAGGAGAAGATCTACGCAGCAGATGGTACAGTAATCCTCGATGTTTCCCCAGGGTTGACCTTTCATGCAGATGAGGCCAACAACTGGATTGGTAGCTCCCTGAACGGGGCTATCATCATGAACAACCCAGTAGACGGTCCTTACGCAATGGCTCCAGAGTTAGGGAATTTTCAAGCCCTACCTAACTGGCCAGCCAACACCCAATGCAAGGTGATGCGTCCATATAAGAACTACCTGATTGCACTGAACATCACTAAGAACTCTGTGGAAATGCCCCAGCTTGTCAAGTGGTCTTCTCCAGCTGATCCCGGTGGTGTCCCTGGTACATGGGATGAGACAGACCCTAAGAATGACGCTGGTGAAAACCCACTGGCTGATACCAACGGTAAGATCGTCGATGGCAAGAAGCTGAGGGACGCCTTCATCATCTACAAAGAAGACTCGGTATACTCCATGCGTTACATCGGTGGTGTGTACGTCTTCCAGTTCCAGCAACTGTTTGATGACGTTGGTATGCTTGGTCCGAATTGTGCTGTTGAGTTTGATGGTAAGCACTTCGTTGTAGGTCAAGGTGATATCTATGTCCACAACGGGGTTGAGAAGAAGTCTGTCATTGATGGTAAGATGCGTAGGTTCTTCTTCAACGATATTAACTCTGAGAACTACCGTAAGACCTTTGTGGTCTCTGATACGGTGAACACTGAAATGTGGGTCTGCTACTCCTCTACCAAGATGGGCGAAGGTGCTTTCTGCGATCGTGCCCTTGTGTGGAACTGGAGTGAAGACACTTGGTCAATGCGAGACATGCCTAACGTGATCTCGGGTGACTATGGGATTATCGACCCGAAGGAATCCAACCTCTGGGATGACGACATGGACCCGTGGGATTCTGACACTACGGTTTGGGGTGCTGGTTCTTACAACCCATCCAAACGTAAGCTGATCTTCACCTCCAACGTTGACAAGAAGATGTACCTCTTTGGTGAATCCTCTACCTTCTCTGGACAGCCTTTCCAATCCTTCTTGGAGCGGACAGACATGTACCTCGGGGAGGACCGGATGATGAAGACCATGAGTTCCATCATTCCTCACATCAGTGGTAACGGTTCCTGCAACGTGTATGTGGGTGCTGCTCAGATTCAAGGTGGTGCCATTAGATGGAAGGGGCCTATCCCCTACCGGATTGGTACTGACTATAAGATTGACTGCAAACACGTGGGTCGCTATGTTGCCGTCCGGTTTGAGTTTGACTCTACCGGGGACTGGGCATTCAATGGGTACACCGCGGAGTATGCACCTAACGCAGGCATGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
479ae121b33709780b968edcee19892e876669031d9f4a7f7e632586b3dfb92a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50