Protein

View in Explore
Genbank accession
XCO42064.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MRQILPSAKAYLANNDKIRLAYLVSIELPGSTGNNAVYAYMTDYMRDISYGGILFQSGKIKTISSHKQNRTLTVGSLSFSVTGTDANEVIKLVQSGVSFLDRSISIYQAIIDDNGEILPVDPDTNGPLLFFRGKIVGGGIKESNTVSGVGTSVITWNCSNEFYDFERVAGRFTDDASHRGLEIVNGELLPSHGAKRPEYQEDYGFFHANKSVNFLAKYQVKEERYKLESKKKLFGLSKSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGTQKVPGIPVFADTERNNPNVVYVVYAFCEGEIEGFLDFQFGDAPMICTDQTDSTSRTCFGQKRVSGDTMARISTGLPSTSLSEHGQEYKYNDGNGDIRIWTFHGKPDQTVATVLRDIAAANNFFLQGENGNGPEYWDSRYKLLDTAYAVIRFTITENRTDIPEVSAELSGRKVKVYQADGSVKMDKTSQNGVWQTFDYLTSTTFGASIPIDRMVIGDWRKEADLLNIIDTSYQTSWQPFWRYVGWESWTAENRQIMQMNTILDNSNSVFKNVQELLESFQGALNNLSGIFRITVEKDSKTPLELNFLDTYGELELSDTTGREKYNSVQASLIDPTLNWKTNSITFYNSKFKNEDRGVDKKLQLSFANITNYYTARSLADRELKKSRYSRSLSFSLPYKFLGIEPNDPVVFTYDRYGWNKKFFLVDEVENTRDGKINVTLREYGEDVFINSTQVDNSSEAVPEISNNVLPPRDFKYTPTPGGMVGDVGKNGELSWLPSLTPNVVYYSIRKSDRVDPYIVQQTAFTPNVRMFQDIVGEPAGLTIFEIRAVDINGRRSSPVTISVDLNSAKNLSVVENFRVLNLSPDPAEWVGPDLELGWDKLQEEGLISGIFYTLEIRDSTNKLLRSVRITSLYNYSYLLSYNKLDYKANNSNTLGIYRALQPRIQAEGPRGEKSVAWAYI
Physico‐chemical
properties
protein length:948 AA
molecular weight: 107031,80900 Da
isoelectric point:5,39967
aromaticity:0,11603
hydropathy:-0,41561

Domains

Domains [InterPro]
DC_0187
STR
232–933
DC_0187
IPR032876
ATT
582–696
IPR032876
XCO42064.1
1 948
Architecture
STR
ATT
STR
STR 232-581 | ATT 582-696 | STR 697-933 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO42064.1
1 948
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9353
Central domain 313 542 231 0,4462
C-terminal 543 948 405 0,0035
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-542
C-terminal
543-948

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146058
[NCBI] 		3232236 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO42064.1 [NCBI]
Genbank nucleotide accession
PP889506.1 [NCBI]
CDS location
range 16064 -> 18910
strand +
CDS
ATGAGACAGATCCTTCCTTCTGCGAAAGCCTACCTTGCCAACAATGACAAGATACGATTAGCGTATCTTGTCTCTATCGAACTCCCGGGGTCCACGGGTAATAATGCTGTTTACGCTTATATGACGGACTACATGAGAGATATCAGCTACGGTGGTATACTCTTCCAATCAGGGAAAATTAAAACAATTAGCAGTCACAAACAAAACCGCACGTTAACCGTCGGTAGTTTGAGCTTCAGTGTTACTGGTACGGATGCCAATGAAGTCATTAAGCTCGTGCAAAGTGGTGTATCATTTTTAGATCGCTCTATCTCTATATATCAGGCGATCATCGACGACAATGGGGAAATCCTTCCTGTGGACCCAGATACTAACGGCCCATTACTCTTCTTTAGAGGTAAGATTGTGGGTGGTGGTATTAAAGAAAGTAATACAGTATCCGGAGTTGGTACTTCTGTTATAACCTGGAACTGTTCTAACGAATTCTACGATTTTGAGCGAGTTGCTGGACGCTTCACAGACGACGCTTCCCACCGAGGACTTGAGATTGTAAATGGAGAATTACTACCTTCTCACGGTGCCAAACGACCGGAATATCAAGAGGACTACGGCTTCTTCCATGCCAACAAAAGCGTTAACTTCTTAGCTAAATATCAAGTAAAAGAAGAACGATACAAGCTAGAATCTAAGAAGAAATTATTCGGTCTCTCCAAGAGCTACAGCCTTAAAAAGTATTATGAGACTGTTACTAAAGAGGTAGACCTGGACTTCAACCTTGCAGCCAAGTTTATTCCTGTAGTGTATGGCACTCAGAAGGTACCTGGTATACCTGTTTTTGCGGATACAGAAAGAAACAATCCAAACGTAGTTTATGTAGTATACGCGTTCTGTGAGGGTGAGATTGAAGGATTCCTCGACTTCCAGTTTGGAGACGCCCCTATGATCTGTACTGATCAAACTGACAGTACCTCTCGTACATGCTTTGGACAAAAAAGAGTATCGGGAGATACTATGGCAAGAATCTCCACAGGACTTCCATCAACATCTCTCTCAGAGCATGGTCAAGAATACAAGTACAATGACGGTAACGGGGATATACGAATCTGGACATTCCACGGTAAGCCAGACCAGACGGTAGCTACGGTACTAAGAGACATTGCTGCTGCTAACAATTTCTTCCTACAGGGAGAGAACGGTAATGGACCGGAGTACTGGGATTCTAGATACAAGCTATTAGATACTGCTTACGCTGTTATACGGTTTACTATTACCGAGAACAGGACCGATATTCCTGAAGTGTCCGCAGAATTAAGCGGCCGTAAGGTAAAAGTGTACCAGGCAGACGGTTCTGTTAAAATGGATAAAACCAGCCAGAATGGTGTATGGCAAACATTTGACTACCTAACCTCCACTACCTTTGGTGCAAGTATCCCGATAGATAGAATGGTTATTGGTGACTGGAGAAAAGAGGCCGATCTATTAAATATTATAGACACCTCTTATCAAACTAGTTGGCAGCCGTTCTGGAGATACGTTGGGTGGGAGAGTTGGACAGCTGAAAACAGACAAATAATGCAAATGAACACAATCCTGGATAACTCCAACTCTGTGTTCAAGAACGTGCAGGAGCTATTAGAATCCTTCCAGGGGGCGTTAAACAACCTATCAGGTATTTTCCGCATTACCGTAGAGAAAGATTCAAAAACCCCGTTAGAGCTTAATTTCCTAGATACTTATGGGGAGCTGGAGCTCTCTGATACTACAGGCCGTGAGAAGTATAACTCAGTTCAGGCGTCCCTAATTGACCCTACCTTGAACTGGAAAACCAACTCTATAACATTCTATAACTCTAAGTTTAAGAATGAAGATCGTGGAGTTGACAAAAAACTTCAACTTTCTTTTGCTAACATAACCAACTACTACACTGCCAGAAGTTTGGCAGATAGGGAACTTAAAAAGTCTCGCTACTCGCGTTCTCTGAGCTTCTCTTTACCTTACAAATTCCTTGGTATAGAACCTAACGATCCTGTAGTGTTCACCTACGATCGATACGGCTGGAACAAGAAGTTCTTCTTAGTCGATGAGGTTGAGAACACAAGAGATGGTAAGATAAATGTAACTCTTCGGGAATATGGTGAAGATGTATTTATTAACTCAACGCAGGTGGATAACAGTAGCGAGGCCGTTCCTGAAATATCCAATAACGTCCTGCCTCCTAGAGACTTTAAGTACACTCCTACGCCCGGTGGAATGGTTGGTGATGTTGGCAAAAACGGAGAGCTCTCATGGCTTCCTAGCCTGACCCCTAACGTAGTCTATTACTCGATACGTAAATCAGACCGTGTGGATCCTTATATTGTGCAGCAGACTGCTTTCACGCCTAACGTTAGGATGTTCCAAGATATCGTGGGTGAGCCTGCTGGGCTGACTATTTTCGAGATCCGCGCTGTTGATATTAATGGTCGTCGTAGCTCTCCAGTAACAATTTCTGTAGATTTGAACTCAGCTAAAAACCTTAGTGTGGTGGAAAACTTCCGGGTGCTTAACCTGTCTCCTGATCCTGCGGAATGGGTCGGACCTGACCTAGAGTTAGGGTGGGATAAACTGCAAGAAGAGGGTCTGATTTCAGGGATTTTCTACACGCTTGAAATAAGGGACAGTACTAATAAACTGCTTAGATCCGTGAGGATCACCAGTTTATATAATTACAGTTATCTGTTGAGTTACAATAAGCTCGACTATAAGGCCAACAACTCGAATACTTTGGGGATTTATAGAGCACTTCAGCCAAGAATTCAGGCAGAGGGACCAAGGGGCGAGAAGTCGGTTGCATGGGCATATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1677dbff975154237d25767000e8364a2a8281a25d57b5fd50444592e29b4e8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8058
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank