Protein

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Genbank accession
XYH49768.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGKGGGGKARTPVEDKDTIESSQMISIIDLWSEGQIFGLSNGLKSVLMDNTQVIADDGSVNIPGVDISYNVGTEDQEYLDGFPQSASEVSVGVEVKQSAPVIRTITDPRINMLRINLYSRALFVITNDGDTKRTDLKMRIEIRKGTAPWETKARIDYIDQKSRNEFSFKAEIWDLPTAPFDVRVVRETPDDQAGDWQQIQNSSFWRSYSQVINQKYRWPFTAYAGIKFDSKAFEGAVPRRNYIVKGMIVKVPVNYDPETRKYNGFWNGQFKAAYTNNPAWIVYDMIKNTRYGLGRRGINIEETEMYKAAQWCDQLVPDGRGGMEPRVTCNCYITEQRNAWDLITDVMSCFRAMPLWDGRQFVPSLDIAKDVVATYNNSNVINGTFEYSASSMQDRHSVIEVRYANKANGYQQDTVQVTDDLMIEQYGWNVLKVEAFGTDTESQAYRFGSYLLETERLERKTVSFTTGAEGLRNLPGDVIAVADSRQFGSIIGGRILEIDADSKGFTIDQPINIPNNAEVYVTVIGDDRKPMDLLCENSSGEHSSLRFSTTCPESLARLSPWSLKINNVGVKLWRCVSVKENDNGTYSINCVEHVPEKNEIVDNGIKFTPPDETLYGNKLPPVENISVEPLVDNPNANVRVFWDAPATARQIRYNVRLYRSGNLIISRNIDDPSISFMADTVGTYRAEVRCLGSDGKLGDSVDAVFVISEPSKPASISWSASNFTVTLRPVAGGITTIGEVYEWFIGSTEQEVLAMNNNLGEAFVLNQVGLKPNTTYWFGARAVNMIGRSAITTVETKTAFETESLEGLINVALPKTDYIQEMNKDLEGLSELASLRVVDKNGGRPRVSGIYLNAGDAGNNIASVIDFVADAVSISSPDTLERWVYFDSTNRRLVLGGEIQAVSGRLRNVVIEEDCVIKGKLSVANIEGYAMEGQSYEFNISNTGGRKDIRYNGNAMIPVRLFGQVWARQYKNQKTQVNINGRRINPLEMAVIVNTGGNVTTRTYTWLFTFVIDLSKGQAADIAITAGDIDQGNSESTSYRAQFWIAPQSNGFTD
Physico‐chemical
properties
protein length:1054 AA
molecular weight: 117450,52620 Da
isoelectric point:5,01959
aromaticity:0,09393
hydropathy:-0,34962

Domains

Domains [InterPro]
DC_0323
STR
1–1040
DC_0323
IPR053171
Unmapped
3–793
IPR053171
IPR055385
ATT
86–213
IPR055385 IPR032876 IPR055383 IPR057587
IPR036116
STR
709–792
IPR036116
IPR003961
STR
709–802
IPR003961
XYH49768.1
1 1054
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-85 | ATT 86-213 | STR 214-333 | ATT 334-498 | STR 499-711 | ATT 712-803 | STR 804-1040 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH49768.1
1 1054
Domain Start End Length (AA) Confidence
N-terminal 1 495 495 0,8087
Central domain 496 921 427 0,0630
C-terminal 922 1054 132 0,9097
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-495
Central
496-921
C-terminal
922-1054

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage BUCT805
[NCBI] 		3411684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH49768.1 [NCBI]
Genbank nucleotide accession
PV277656.1 [NCBI]
CDS location
range 19021 -> 22185
strand +
CDS
ATGGGCAAAGGCGGAGGCGGTAAGGCAAGAACTCCTGTTGAAGACAAAGACACCATCGAATCAAGCCAGATGATTTCGATTATTGACCTATGGTCTGAGGGTCAAATCTTCGGCTTGAGTAACGGCCTGAAATCCGTGCTCATGGATAATACGCAAGTCATCGCAGACGATGGCAGCGTGAATATTCCGGGCGTGGATATTTCTTATAATGTCGGAACAGAAGACCAAGAATATTTAGACGGATTCCCTCAAAGCGCATCCGAGGTTAGCGTAGGCGTAGAGGTAAAACAGTCAGCACCGGTTATTAGAACAATCACCGACCCGCGCATTAATATGTTGCGCATAAACCTCTATAGCCGGGCGCTTTTCGTTATAACCAATGATGGCGACACGAAGCGAACGGATTTAAAGATGCGCATCGAAATTCGAAAAGGGACTGCCCCTTGGGAAACTAAGGCGCGAATAGACTATATAGACCAGAAGTCAAGAAATGAGTTTTCATTCAAAGCGGAGATTTGGGATTTACCGACTGCGCCATTTGATGTGCGAGTTGTTCGCGAGACTCCAGACGACCAAGCTGGCGACTGGCAGCAGATTCAAAACTCGTCTTTCTGGCGCTCGTACTCACAGGTAATTAACCAGAAATATCGCTGGCCTTTTACTGCATATGCTGGAATTAAGTTTGACTCCAAGGCGTTTGAGGGTGCTGTTCCGCGTCGCAATTATATCGTCAAGGGAATGATTGTTAAGGTGCCGGTAAACTACGACCCGGAAACCCGTAAATATAATGGCTTCTGGAATGGTCAATTTAAGGCGGCTTATACAAATAACCCGGCTTGGATTGTCTACGATATGATTAAAAACACGCGCTACGGCTTGGGGCGTCGTGGCATTAATATCGAAGAAACCGAAATGTATAAAGCCGCTCAATGGTGCGACCAATTAGTGCCTGACGGGCGTGGTGGAATGGAGCCGCGAGTAACCTGTAATTGCTATATCACCGAACAGCGAAACGCTTGGGATTTGATTACTGACGTTATGAGCTGTTTCCGCGCAATGCCATTATGGGACGGACGCCAGTTTGTGCCATCTCTTGATATTGCAAAAGACGTTGTAGCTACATATAACAACTCTAACGTAATTAATGGCACTTTCGAATATAGCGCCTCCTCTATGCAAGACCGACACTCCGTAATTGAAGTTCGATACGCCAATAAAGCAAATGGCTATCAACAGGACACGGTTCAAGTAACTGACGACCTGATGATAGAGCAATACGGCTGGAACGTTTTGAAGGTGGAGGCGTTCGGAACCGATACTGAGTCACAGGCTTACCGCTTTGGGTCTTATTTACTGGAAACTGAAAGACTGGAAAGGAAGACGGTTTCTTTCACGACTGGCGCTGAGGGTTTGCGAAACCTTCCGGGAGATGTTATTGCTGTTGCTGACTCTCGTCAATTTGGCAGCATTATCGGCGGGCGAATTCTTGAAATAGATGCAGACAGCAAGGGCTTCACTATTGACCAGCCGATTAATATTCCAAATAACGCAGAAGTGTATGTGACTGTAATTGGCGACGACAGGAAGCCGATGGACTTACTTTGCGAGAATTCTTCTGGCGAGCATTCATCTTTGAGATTTTCCACCACTTGCCCCGAAAGTTTGGCGCGATTATCTCCTTGGTCGTTAAAAATAAATAACGTCGGCGTTAAATTGTGGCGGTGTGTAAGTGTAAAGGAAAATGACAATGGCACTTATTCGATTAACTGCGTTGAGCACGTTCCAGAGAAGAACGAAATAGTCGATAACGGCATTAAGTTCACCCCGCCCGATGAGACTCTTTACGGGAATAAATTACCTCCCGTTGAGAATATCAGCGTAGAGCCTTTGGTGGACAACCCAAATGCTAACGTTCGAGTTTTCTGGGATGCGCCAGCCACGGCAAGACAGATTCGCTACAACGTCAGACTTTATCGCTCTGGTAATTTGATTATTAGCAGAAATATTGACGACCCATCAATTTCGTTCATGGCAGACACTGTCGGAACTTATCGCGCCGAAGTTCGATGCCTTGGGTCTGATGGAAAGTTGGGTGATTCAGTCGATGCAGTGTTTGTTATTTCCGAGCCATCAAAGCCAGCGTCTATTTCTTGGTCTGCATCAAACTTCACTGTAACACTTCGCCCGGTTGCCGGAGGTATCACTACAATAGGCGAGGTGTATGAATGGTTTATAGGCTCAACTGAGCAAGAAGTTTTAGCTATGAACAACAACCTTGGCGAGGCTTTTGTTTTGAACCAAGTCGGGTTGAAGCCGAATACAACTTATTGGTTTGGCGCTCGGGCGGTAAATATGATTGGCCGCTCCGCAATCACTACCGTGGAAACAAAGACGGCTTTCGAAACGGAATCTCTTGAAGGTCTTATTAACGTGGCTTTGCCAAAAACAGATTATATACAGGAGATGAACAAAGACCTCGAAGGTCTTAGCGAATTAGCATCGCTGCGAGTGGTTGACAAAAATGGGGGTCGCCCGCGCGTGAGCGGAATCTATCTTAACGCCGGTGATGCCGGTAACAATATCGCATCGGTGATTGATTTCGTGGCTGACGCCGTCTCTATCTCAAGCCCTGACACGCTAGAGCGGTGGGTGTATTTTGACTCGACCAACAGGCGCTTGGTGCTGGGTGGCGAGATACAGGCCGTTTCGGGGCGTCTTCGGAATGTAGTCATTGAAGAGGATTGCGTAATCAAGGGCAAGCTGTCCGTTGCTAACATCGAGGGCTATGCAATGGAGGGGCAGAGCTACGAGTTTAATATATCTAATACCGGCGGAAGGAAGGATATTCGCTATAACGGCAATGCCATGATACCCGTTCGCCTGTTCGGCCAGGTATGGGCGAGGCAGTACAAAAACCAGAAAACGCAGGTTAACATTAACGGTAGGCGCATAAACCCGCTGGAAATGGCCGTTATAGTGAATACCGGCGGTAATGTGACGACACGGACTTACACATGGCTGTTTACGTTTGTCATAGACCTGAGTAAGGGTCAGGCGGCTGATATAGCCATTACAGCCGGAGATATAGACCAAGGAAACAGCGAATCTACGTCTTACAGGGCGCAGTTCTGGATTGCTCCGCAGTCCAACGGGTTCACCGATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5629bedd6f01274d752fff9849b9bd46abd270118cdb2efe88e556b34215a951
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8335
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50