Protein

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Genbank accession
ACT65634.1 [GenBank]
Protein name
fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MPYGKLKVDSIETSAEELTLPTNAGSAGQVLTTDGSGVLSFTTNPAGCDLSATATGSGLTVESSNGDNVALPAASVSAWGLMTDEDKAKLDSIDNGASADQTGAEIKTAYEAEADTNAFTDAEKTKLSGIPAGANEYVISADLLDEDDFASDSATKPASQQSIKAYVDGEVSNLVNSAPATLDTLDELAAALGDDQNFATTMTNNLASKAPLNEPNFTGNVDMDTHLNVAGAIDAGGPVNVGAALDTGSGVNIYGGGSVYIRQTGTGTSDKLLILQNNNSAEVASLNGGGGATFATDVTVTSGHFMASSDSSSAKTFISGSSGSENAVIRASGKAEFTGVTVSGQAVGAVVALTDAATVAVDLSLSNNFSLTTTAGVGDTRTLGTPTSALPGQSGVIWIHQDATGSRQLAYAAEWKFAGGTAPVLSTDADAVDCLAYSVLANDKILATAILKVS
Physico‐chemical
properties
protein length:454 AA
molecular weight: 45485,14980 Da
isoelectric point:4,05264
aromaticity:0,04846
hydropathy:-0,02313

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACT65634.1
1 454
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,9901
Central domain 220 418 200 0,1233
C-terminal 419 454 35 0,9379
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-418
C-terminal
419-454

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PSS2
[NCBI] 		658401 No lineage information
Host Prochlorococcus marinus str. MIT 9313
[NCBI] 		74547 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACT65634.1 [NCBI]
Genbank nucleotide accession
GQ334450 [NCBI]
CDS location
range 44988 -> 46352
strand +
CDS
ATGCCTTACGGCAAGCTCAAAGTCGACAGTATCGAGACTAGCGCGGAGGAGCTGACGCTGCCCACGAACGCGGGTAGTGCTGGGCAAGTCCTCACAACTGACGGCAGTGGCGTCCTTTCGTTCACAACAAATCCCGCAGGCTGTGACCTGTCCGCTACAGCGACTGGGTCTGGTCTCACGGTTGAAAGTTCCAATGGCGACAATGTTGCACTCCCGGCGGCTAGCGTCTCTGCCTGGGGTTTGATGACTGATGAAGATAAGGCAAAGCTCGACTCGATTGATAACGGTGCAAGTGCTGATCAGACCGGCGCTGAAATAAAGACAGCCTATGAGGCTGAAGCTGACACAAATGCTTTTACTGATGCAGAGAAAACAAAACTTTCGGGTATCCCGGCTGGCGCGAATGAATATGTCATCTCAGCTGACCTGTTAGACGAAGACGACTTCGCTAGTGACTCGGCGACGAAGCCGGCTAGTCAACAAAGCATCAAGGCTTATGTCGACGGCGAGGTTTCAAACCTGGTTAACTCGGCGCCTGCGACCCTCGACACACTCGACGAGTTAGCGGCTGCTTTGGGTGACGACCAGAACTTCGCCACCACAATGACCAATAACCTTGCGAGTAAGGCTCCTTTAAATGAGCCAAACTTTACGGGTAACGTGGACATGGATACCCACTTAAACGTGGCAGGCGCTATTGACGCTGGTGGGCCAGTCAATGTTGGAGCAGCATTAGACACTGGTTCTGGTGTAAATATTTATGGTGGTGGTTCTGTCTATATCCGACAGACTGGTACAGGAACTTCTGATAAACTATTAATTCTCCAAAATAACAATAGCGCTGAAGTTGCTAGTTTGAATGGAGGAGGAGGCGCCACGTTCGCTACTGATGTAACAGTTACAAGTGGTCATTTCATGGCCAGTAGTGATTCTTCTAGTGCTAAAACATTTATTAGCGGCTCTAGTGGTAGTGAAAATGCCGTAATAAGAGCTAGTGGAAAAGCCGAGTTTACTGGCGTCACTGTTAGTGGGCAGGCGGTTGGAGCAGTTGTAGCCCTTACAGACGCAGCAACGGTTGCTGTTGATTTAAGCCTATCTAATAACTTCAGCCTAACGACAACTGCAGGGGTTGGAGATACTCGCACACTAGGCACGCCAACCAGTGCATTACCAGGGCAATCAGGTGTGATTTGGATTCATCAAGACGCCACTGGCTCCCGTCAGCTGGCCTACGCGGCTGAGTGGAAGTTTGCAGGAGGCACGGCCCCGGTCTTATCGACTGATGCCGATGCTGTCGACTGCCTGGCTTACTCAGTCCTAGCTAACGACAAAATCCTGGCCACCGCAATCCTGAAGGTCTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a3e088b2bd7d59569fee903aa6b39998f5cd82e89398e9d1db31cd4a924d7b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7571
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50