Protein

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Genbank accession
YP_009206680.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MRKLYLGNGDKKFKFADTTTEIHLIAFDDGSAATLTADAKVRIKNDSGYLLGISASITNNHAVITSGQLAQLPVGSYLLELWNTVDGGTAIYPSDGFLALQINENVTGISGGLVSSITVDDFIQQFSDLSQQLKQEVSVAVANGLKGDKGADGLSAYQVAVINGYKGSQTDWLASLVGPKGDKGDKGDAGKDFQIVKTFPSIAQMNGDGFSDGDFTMIASDVNDPDDGKLYVWNGTSFTYIADLSGSQGIKGDKGDKGDKGDKGDKGDQGLSAYQVAVNAGFSGSVNQWLASLVGAKGDKGDKGADAVINIISQAAYDALADKSGVYFIEG
Physico‐chemical
properties
protein length:331 AA
molecular weight: 34516,82110 Da
isoelectric point:4,50406
aromaticity:0,08459
hydropathy:-0,20634

Domains

Domains [InterPro]
DC_1725
STR
2–242
DC_1725
IPR050149
Unmapped
144–304
IPR050149
DC_1967
ATT
218–325
DC_1967
YP_009206680.1
1 331
Architecture
STR
ATT
STR 2-217 | ATT 218-325 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage CL1
[NCBI] 		1739607 Uroviricota > Caudoviricetes > Colunavirus >
Host Lactobacillus paracasei
[NCBI] 		1597 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009206680.1 [NCBI]
Genbank nucleotide accession
NC_028888.1 [NCBI]
CDS location
range 18656 -> 19651
strand +
CDS
ATGAGGAAGCTATATCTTGGCAACGGCGATAAAAAGTTCAAATTTGCCGACACCACAACTGAAATACATTTGATTGCGTTCGATGATGGCAGCGCAGCAACATTAACAGCAGATGCAAAGGTCAGAATCAAAAACGACTCTGGATATTTGCTGGGGATAAGTGCCAGTATCACGAACAATCATGCCGTTATTACTAGCGGACAATTGGCTCAATTGCCAGTCGGAAGCTATCTCCTTGAGCTGTGGAACACCGTAGACGGTGGTACTGCAATCTATCCTAGCGATGGATTTTTGGCACTTCAAATCAATGAGAACGTCACTGGTATTTCTGGGGGACTTGTCAGCAGCATCACGGTTGATGACTTCATTCAGCAGTTCAGTGACCTTAGTCAGCAGCTAAAGCAAGAAGTATCTGTTGCTGTTGCCAATGGTCTGAAAGGCGATAAGGGTGCTGATGGACTATCTGCCTATCAAGTCGCGGTCATTAATGGCTATAAAGGCTCGCAAACGGACTGGCTTGCATCTCTCGTTGGCCCTAAAGGTGACAAGGGCGATAAAGGCGATGCGGGGAAAGACTTCCAAATCGTAAAGACGTTCCCGTCCATTGCTCAAATGAATGGTGATGGCTTCTCTGATGGTGATTTCACCATGATTGCCAGTGACGTCAATGATCCTGATGACGGTAAGCTTTACGTATGGAACGGCACCAGCTTCACCTATATTGCCGACTTAAGTGGCTCGCAAGGTATCAAAGGCGACAAAGGTGACAAAGGCGACAAAGGCGACAAAGGTGACAAAGGAGATCAAGGACTTTCTGCATATCAGGTTGCCGTGAATGCTGGTTTCTCTGGAAGTGTCAATCAATGGCTTGCCTCTCTTGTTGGCGCTAAAGGTGACAAGGGTGACAAAGGCGCTGATGCCGTTATCAATATCATCTCGCAAGCCGCTTATGATGCATTAGCCGACAAGTCCGGTGTTTACTTCATTGAGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
38e94fa2b4e2cc8ea3b886424f51481e8e4acf069f75921b11101e30efacc44a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8390
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50