Protein

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Genbank accession
XRX02937.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MTVLERVNLGSEPDGKGGDTTRSAFNKLNEDLDVIERTCSLDMAFLHDSADLTPAHVGKRFGLRIADAGKVIGFPLASSVPPNSCIHLFNVQERVAIKFQAGDLSQLNVLNTGDWVKYVSDGVKIWHVAERGKMMWDEAVGGKLSVSGALDTGGDLSVARQSDEGHVVLGKMPGYLYGNSGSVGWWSSDAGGSYQYLLSDHTFRVNDEVVAVCDKGNALRFDWGKKTAGQLGATVDGKYLGYLWHSGNLAQPMTLDTPQFVGTKKTFTQAQEIAVGATGLHTQASLYLNGMGGLSYLGFSGLNNTVGAQLRISSNTSVAELQCVNYNATTFGVLTASNFNQASDRAFKSDIQTLENVMARLRGKRGVTYLPKSSPGAGRQAGVIANEWRDFPELLGEGPEIDEDGDFIVRQYDERGKEIFGEGGPPSARPSLTFRYTNAVGVLLAGLLETDAALQSALKRIEALEAKQCQ
Physico‐chemical
properties
protein length:470 AA
molecular weight: 50532,14800 Da
isoelectric point:5,48965
aromaticity:0,08298
hydropathy:-0,23617

Domains

Domains [InterPro]
DC_0954
ATT
5–156
DC_0954 IPR030392
DC_0745
STR
137–408
DC_0745 Coil
IPR030392
CHP
343–390
IPR030392 DC_0869
XRX02937.1
1 470
Architecture
ATT
STR
RBD
ATT 5-156 | STR 157-408 | RBD 409-468 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX02937.1
1 470
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,5436
Central domain 169 367 200 0,0826
C-terminal 368 470 102 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-367
C-terminal
368-470

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_SBP9
[NCBI] 		3416991 Viruses >
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX02937.1 [NCBI]
Genbank nucleotide accession
PQ789808.1 [NCBI]
CDS location
range 11496 -> 12908
strand +
CDS
TTGACAGTTCTTGAGCGTGTAAACCTCGGCTCGGAGCCCGATGGTAAAGGAGGCGATACCACTCGCTCAGCGTTCAATAAGCTGAACGAGGACCTCGATGTGATCGAACGAACTTGCTCCCTCGATATGGCGTTCTTGCACGACAGTGCCGATTTGACGCCGGCACATGTTGGTAAAAGATTCGGACTACGGATCGCTGATGCTGGAAAGGTAATCGGGTTTCCGCTCGCGTCGTCTGTACCGCCGAACTCCTGCATTCATTTGTTCAACGTTCAGGAACGGGTCGCGATCAAGTTTCAGGCCGGCGACCTGTCTCAACTGAACGTACTGAATACCGGCGACTGGGTAAAGTACGTGTCGGACGGTGTGAAAATCTGGCACGTCGCGGAGCGCGGCAAGATGATGTGGGATGAGGCTGTCGGCGGCAAGTTGTCAGTCAGCGGCGCGCTGGATACTGGTGGTGATCTATCGGTTGCGCGTCAGAGCGACGAAGGGCACGTTGTACTAGGCAAGATGCCCGGCTATCTCTACGGCAACAGTGGGTCGGTGGGTTGGTGGTCTTCAGATGCCGGAGGATCGTACCAATACCTACTCAGCGACCATACGTTTCGCGTCAACGACGAGGTAGTCGCGGTATGCGACAAGGGGAACGCCCTTCGATTCGACTGGGGGAAGAAGACCGCCGGCCAGCTCGGGGCGACGGTCGACGGCAAATACCTGGGCTATCTCTGGCACAGCGGTAATCTTGCCCAGCCGATGACACTTGACACGCCGCAGTTCGTTGGGACAAAGAAGACGTTCACGCAGGCGCAGGAAATCGCTGTCGGTGCCACCGGGCTTCATACGCAAGCGTCGCTGTACCTGAACGGAATGGGCGGTCTCAGCTATCTCGGATTCTCTGGGCTGAACAACACCGTTGGCGCTCAGCTTCGGATTTCCAGCAACACCTCGGTCGCTGAATTGCAGTGCGTCAACTACAACGCTACGACATTCGGTGTATTGACCGCATCGAACTTCAATCAGGCGTCCGACCGTGCTTTCAAATCCGATATCCAGACGCTTGAGAACGTAATGGCGCGGCTGCGCGGTAAGCGGGGCGTGACGTATCTACCAAAAAGCAGTCCGGGCGCAGGGCGACAGGCTGGCGTCATCGCAAACGAGTGGCGGGATTTCCCTGAACTGCTCGGCGAGGGGCCGGAGATAGATGAGGACGGCGATTTCATCGTGCGTCAGTACGATGAGCGCGGCAAGGAGATTTTCGGCGAGGGCGGGCCTCCGAGCGCGCGGCCGTCGCTGACCTTCCGTTACACGAATGCAGTCGGCGTACTACTCGCGGGTTTACTCGAAACGGACGCCGCGCTCCAAAGCGCACTTAAGCGTATTGAGGCACTGGAGGCTAAGCAGTGCCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ef57ba94df4ae46dee54ddedfb2bc668ec7dfff75b3c08986279d3da71d2278f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7596
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50