Protein

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Genbank accession
QKN84466.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MVNMNNENKNVSIRHIAHPLMSASVERFVAKPGTTIAEMLSEINYPIQNVDGVMVWLNGVPVENFDKVCIRSGDVVNIRPIVKGDNVGSILATIATIVISIYFPPAAAAAGFGKMASAFITAGAIFAATKLIYAAFPPPKPQEYSKKESYLLAGTQNRQRQYEPMPVVIGQMRVAPDSANMPYGTFEDNDQYVYQVFNFGLQKNLVISDYEIAGTKVGDFSEPPTITRSDEHGNLPAEFNDVEVIQGGEVKNDAGPLVKTTSKGAIRIDIDLQVVAYDVKDDGGISTKGISVEIRIFNNADNSLVSETSSVYSGDGVNDNRHTITGQDLPAGTYRVEITKASGDFSDSKKQRNLSVVAIKAFQEDKTDYSNYTRIGVKMKASNQLSGSIEELTALVHSEIPLFDGVSWNIGKTSNPAWWLLYWARGLRTASGQILFGAGLGDHQINMEQIKRFAAFCDRKKLTCNMWLNREATVKQVADVIARCGRGEYTWGTGKFGAIFDDDQLSEIAVFGPSNVRAGSFKVNYNADQTADEVIVNYLNEDDHYNADSVRVNVGNTQTPERPIQFQFEGCTNTDMAGREARMIAAAQELMRRTVSWETDIEGVFLKRGDVVRLSHDMIGWSESGRVRAAVDRKTFFIDKAINFTSAAYIGIRTPDGKYETFKIAKVEGLKVTLKDTPPVNFKMPGEINTTSLDWLWFYDEGGKPGKLVKITDIQPKDVHTLSFTAKDYLEEYYQSETGDYVHVEKPETTLPVNNIIPGVLAWESYRASGENKILVLALSWIPISTVNNYTVRIWDSQVGGEKQSTTSNSGIRFDVSPGTYNYRISGTDSITGAIYSAVGTITITGSATVNPLTEVRAEGMLGGIIVSWKYPTNALNLRKVDIVARWNALDGSQSYVETFSEPYPINTLTHSGLDVAQRVDYELTLVDAEGNKSTPVNVFGITSDNIDQIIDAIDGQLGESALDQSLKDRIDKIDSVDSEFNQYKQQTDAELAQVNAEIAAAKQEASQGINEAKNEITDVNNTLTGAVNNANSEIDQVKQDLANAVSQEQENNAQLKKELEALIAVAGVTTYSQPDQPAKGKEGDIWFKEDAQGNVIDVYRFHNGAWELSSHADIEANAAAIINEQTVRASADEALGHRIDALVVKTGSNEAAITAESTARANADSAITQLVNEVKATSEGNSAAIKSEETARTDADTALANKIDALTTTVGKNTADITTEQTVRANADTALSQRIDRVSSKSDQNEAAISAESTTRASADGALSMRIDSVTAKAGANESAIQSEITARTDADSALSSRIDSVTAKAAQNEAAITAEATARADADKAFASSMQTISAEVTSNKENAGDLYTVRSIHQSTKKVYIKATQKYMKLVY
Physico‐chemical
properties
protein length:1375 AA
molecular weight: 149607,98860 Da
isoelectric point:4,90250
aromaticity:0,07345
hydropathy:-0,33375

Domains

Domains [InterPro]
DC_0129
STR
1–1082
DC_0129 DC_2230
NF040662
Unmapped
264–735
NF040662 Coil DC_0292 DC_2079
IPR053171
Unmapped
444–1257
IPR053171
IPR032876
ATT
508–628
IPR032876
QKN84466.1
1 1375
Architecture
STR
ATT
STR
RBD
STR 1-507 | ATT 508-628 | STR 629-1273 | RBD 1274-1368 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKN84466.1
1 1375
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,8610
Central domain 217 415 200 0,2072
C-terminal 416 1375 959 0,0393
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-415
C-terminal
416-1375

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Marilyn
[NCBI] 		2736287 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN84466.1 [NCBI]
Genbank nucleotide accession
MT448615.1 [NCBI]
CDS location
range 1 -> 42407
strand -
CDS
ATGGTTAACATGAACAACGAAAATAAAAATGTTTCCATCAGACATATTGCACACCCACTTATGTCTGCTAGTGTCGAGCGCTTTGTGGCAAAGCCAGGCACTACGATTGCAGAAATGCTGAGTGAAATTAATTACCCAATCCAAAACGTTGATGGTGTAATGGTTTGGCTCAATGGCGTCCCTGTTGAGAATTTCGATAAGGTATGCATCCGCTCTGGTGACGTGGTGAACATTCGCCCGATCGTTAAAGGTGATAACGTCGGCTCAATCCTTGCGACCATTGCAACCATTGTTATCTCAATTTATTTCCCACCTGCCGCCGCTGCAGCTGGATTTGGTAAAATGGCGTCTGCGTTTATCACTGCAGGTGCTATTTTTGCTGCGACAAAATTAATTTACGCCGCATTCCCTCCGCCAAAGCCTCAAGAGTACTCAAAAAAAGAAAGCTATTTATTGGCTGGTACGCAAAACCGCCAACGCCAATACGAGCCAATGCCTGTTGTTATTGGTCAGATGCGAGTGGCACCTGACTCTGCAAACATGCCTTACGGTACATTTGAAGATAACGACCAGTACGTTTACCAAGTGTTTAATTTTGGCTTACAGAAAAACCTTGTGATCAGTGATTACGAAATCGCCGGTACTAAGGTGGGTGATTTCAGCGAACCGCCAACAATTACGCGTAGCGATGAGCACGGGAACTTACCAGCTGAATTTAATGACGTCGAAGTAATTCAAGGTGGCGAAGTAAAAAACGACGCCGGTCCACTTGTTAAGACTACGTCAAAAGGCGCTATCCGCATCGATATCGATTTACAGGTTGTGGCGTACGACGTAAAAGACGATGGCGGAATTAGCACCAAAGGAATTTCCGTTGAAATCAGAATCTTCAATAACGCAGATAACTCCCTTGTTTCTGAAACCTCAAGCGTTTACAGCGGCGATGGCGTAAACGACAACCGCCATACAATAACCGGTCAAGACTTACCCGCTGGTACGTACCGAGTTGAAATTACCAAAGCGTCTGGCGACTTTAGCGACTCAAAGAAACAGCGCAATTTAAGCGTTGTTGCCATTAAGGCATTCCAAGAAGATAAGACGGATTACAGCAATTACACGCGCATCGGCGTAAAAATGAAGGCATCAAACCAGCTATCCGGCTCGATCGAGGAGTTGACGGCGTTGGTGCACTCAGAAATCCCGCTTTTTGATGGTGTTTCTTGGAATATCGGAAAAACCTCAAACCCTGCTTGGTGGCTTTTGTATTGGGCTAGAGGTCTGCGCACCGCGTCAGGTCAAATTCTTTTTGGTGCCGGTCTTGGTGATCACCAAATTAACATGGAGCAAATTAAGCGATTTGCTGCATTCTGTGACCGAAAAAAATTAACGTGCAATATGTGGCTTAATCGAGAGGCAACGGTTAAACAAGTTGCCGACGTTATTGCTCGCTGTGGTCGTGGTGAGTATACGTGGGGTACTGGTAAATTCGGCGCTATTTTTGACGACGATCAACTATCTGAGATTGCCGTATTCGGTCCTTCAAACGTTCGTGCTGGCTCATTTAAGGTTAATTACAACGCCGACCAAACTGCAGATGAAGTCATCGTTAACTACCTAAACGAAGATGATCATTACAACGCCGACTCAGTGCGTGTGAATGTTGGCAATACTCAAACGCCAGAGCGTCCAATTCAATTTCAATTTGAAGGTTGTACCAATACCGACATGGCAGGTCGTGAGGCTCGCATGATTGCTGCGGCTCAAGAGCTAATGCGCCGCACGGTAAGCTGGGAAACTGACATCGAAGGCGTATTTTTGAAGCGTGGCGATGTTGTTCGCCTAAGTCATGACATGATTGGGTGGTCTGAATCTGGTCGAGTTCGCGCAGCAGTAGACAGAAAAACATTTTTTATCGATAAGGCGATAAATTTTACATCAGCTGCTTACATTGGCATTCGAACGCCGGACGGAAAATACGAAACATTTAAAATCGCCAAGGTGGAAGGGTTAAAGGTAACCCTAAAAGACACTCCGCCTGTTAACTTTAAGATGCCAGGTGAAATTAACACCACCTCTCTTGATTGGCTTTGGTTTTATGATGAAGGCGGAAAGCCGGGTAAGTTGGTAAAAATTACCGACATCCAGCCAAAAGATGTACACACCCTATCGTTTACTGCAAAAGACTACCTAGAGGAATATTACCAGTCTGAAACTGGTGATTACGTTCACGTAGAAAAGCCAGAAACAACACTTCCTGTTAATAACATCATACCGGGTGTTTTGGCGTGGGAGTCTTACCGTGCAAGCGGTGAAAATAAAATCCTTGTACTGGCTTTATCTTGGATCCCTATCTCTACAGTAAATAATTACACCGTTCGAATTTGGGATAGCCAAGTTGGTGGTGAGAAGCAATCAACAACGTCAAATAGCGGTATCCGTTTTGATGTCTCTCCAGGTACTTACAACTACCGAATTTCTGGCACAGATTCTATTACAGGAGCAATTTACAGCGCAGTCGGTACCATTACGATCACTGGCTCAGCTACAGTAAACCCACTCACTGAGGTTCGTGCAGAGGGAATGCTTGGTGGGATTATTGTTTCGTGGAAATACCCAACAAACGCACTTAACCTTCGCAAGGTTGATATTGTTGCTCGCTGGAATGCGCTCGATGGTTCACAGAGCTACGTAGAGACATTTTCAGAACCTTACCCAATTAATACGCTAACGCATAGCGGATTAGACGTTGCTCAGCGCGTAGATTACGAATTAACGCTGGTGGATGCAGAGGGAAATAAATCTACACCTGTAAATGTGTTTGGCATTACCAGTGACAACATTGACCAAATCATCGATGCAATTGATGGGCAACTTGGTGAGAGTGCTCTTGATCAATCGTTAAAAGACCGAATTGATAAAATTGACTCTGTAGATAGCGAGTTTAACCAATACAAACAACAAACCGATGCGGAGCTTGCTCAAGTTAATGCGGAAATTGCAGCCGCCAAGCAAGAAGCGTCGCAAGGCATTAATGAAGCAAAAAACGAAATAACCGATGTTAACAACACACTTACCGGCGCAGTAAATAACGCCAATTCAGAAATCGACCAAGTAAAGCAGGACTTGGCGAACGCAGTATCACAAGAGCAAGAAAACAACGCGCAGCTAAAAAAAGAGCTTGAAGCCCTAATTGCGGTTGCTGGCGTTACAACCTACAGCCAACCGGACCAACCAGCAAAAGGCAAGGAAGGTGATATTTGGTTTAAGGAAGACGCACAAGGCAATGTTATTGATGTTTACCGCTTCCACAACGGCGCGTGGGAATTGTCATCACACGCAGACATTGAAGCTAACGCCGCAGCAATTATCAACGAGCAAACCGTACGTGCATCAGCCGATGAGGCTTTAGGTCATCGAATTGACGCGTTGGTGGTAAAAACTGGATCAAACGAAGCTGCAATCACTGCAGAGTCAACAGCGCGTGCAAATGCCGATAGCGCCATCACTCAGCTAGTAAACGAAGTTAAGGCGACATCGGAAGGCAACAGCGCAGCAATAAAAAGCGAAGAGACGGCGCGTACTGACGCCGACACGGCGCTAGCAAATAAAATTGATGCACTAACCACTACGGTAGGCAAAAACACCGCTGACATAACCACGGAGCAAACTGTAAGGGCTAATGCTGATACAGCTCTAAGTCAACGAATTGATCGGGTAAGCTCAAAATCAGACCAAAACGAAGCGGCAATTAGCGCAGAGTCAACTACTCGCGCATCTGCAGATGGCGCATTGAGCATGCGCATTGACTCTGTTACCGCCAAAGCTGGTGCAAACGAATCTGCCATTCAATCAGAAATTACTGCGCGTACTGATGCTGATAGCGCACTATCAAGTCGTATCGACTCTGTAACAGCAAAGGCTGCTCAGAACGAAGCGGCAATCACGGCAGAGGCTACAGCTAGAGCTGATGCAGATAAGGCTTTTGCATCATCAATGCAAACTATTAGCGCAGAGGTAACAAGCAATAAAGAAAATGCAGGTGATTTGTACACGGTTAGATCAATCCATCAAAGCACAAAAAAGGTCTATATAAAGGCGACACAAAAATACATGAAGCTGGTCTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dcc2d1d5a1db11c60e6ec30fb4ebf84bc834ace0266e9831e43ce51b9017b22e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7617
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50