Protein

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Genbank accession
WYW02121.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRLTLATVNAEIAKSGDKETLVKGKGYFYWIGGRADADPQIWTSIYVAALNHMTLAEWLEDWKRNDDQYNKPTPDKETRKMAIRHVQTLAAPAKSGKTASANPELEAAEAELKKVQSTIQGFKARGLVPTSPWERKLKDAKAAVSAAKKKKTTAAPAQETASPATDFAKSLKKGVRVLVNLGNTKEPSYFLGAITKNNASKGSVNVLFDDGDVAEVRAIKSKVGIVGIAIDKVRKSEVPADQIDKWLAGAAPTTKTPASPKAAGEWTVKSIVAWLESAGYTKPEPTRLPTRFERKLPSGAVIQADVNMKKTLALTAMGKEGYVHYTVDSFAKLKNADSSLAKSAVVGTKVGNALIPPKKSGSSKPFSPAEARKVIGAIPGWKTSNVKNKASATFTKDYPNGVTATALIFPTHVTFNYPQGENDHVGDLSKIPAYIQQIDEDQAAPVEDGKALDDLAKALKGWPNKVLPRDADEDNFLLRGFEDDDLPADVEPTADAIEAHAISIFKKMKSVDNFKKSKMYHGDNTYSFSAGGTVGYVYFDEDGVGMVRATPFQESTPGKS
Physico‐chemical
properties
protein length:561 AA
molecular weight: 60533,98730 Da
isoelectric point:9,25877
aromaticity:0,07665
hydropathy:-0,45526

Domains

Domains [InterPro]
DC_2252
STR
1–561
DC_2252
Coil
Unmapped
106–126
Coil
WYW02121.1
1 561
Architecture
STR
STR 1-561
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Voja-6
[NCBI] 		3132646 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW02121.1 [NCBI]
Genbank nucleotide accession
PP496442.1 [NCBI]
CDS location
range 10283 -> 11968
strand +
CDS
ATGACCAGATTGACCCTAGCAACCGTCAACGCCGAGATAGCAAAGTCCGGTGACAAAGAAACTCTGGTCAAGGGTAAGGGCTACTTCTACTGGATAGGTGGCCGTGCCGATGCCGATCCTCAAATCTGGACTTCCATTTACGTTGCTGCGCTAAACCATATGACGCTGGCCGAGTGGCTGGAAGACTGGAAGCGCAATGACGACCAATACAACAAACCTACTCCCGACAAGGAAACCCGCAAAATGGCTATCAGACACGTTCAGACCCTCGCAGCTCCTGCCAAATCCGGTAAGACGGCATCTGCCAACCCAGAACTGGAAGCAGCCGAAGCTGAACTTAAAAAGGTTCAGAGCACCATTCAGGGTTTCAAAGCCCGTGGCCTGGTCCCTACTTCCCCGTGGGAAAGGAAACTCAAGGACGCTAAGGCAGCTGTGTCCGCTGCCAAGAAAAAGAAGACCACTGCTGCTCCTGCACAGGAGACGGCGTCCCCAGCTACCGACTTCGCCAAGTCGTTGAAGAAGGGCGTTCGTGTACTGGTCAATCTCGGCAACACCAAAGAGCCGTCCTACTTCCTCGGCGCCATCACCAAGAACAACGCCAGCAAGGGTTCGGTCAACGTGCTGTTCGATGACGGCGACGTTGCAGAGGTACGTGCGATCAAATCCAAGGTCGGTATCGTGGGCATCGCCATCGACAAGGTACGCAAGTCGGAAGTTCCTGCTGACCAGATCGACAAGTGGCTGGCCGGTGCAGCTCCAACGACTAAGACCCCTGCCAGCCCGAAAGCGGCGGGAGAGTGGACTGTCAAGTCTATTGTGGCGTGGCTGGAAAGTGCAGGCTATACCAAACCAGAACCAACTCGGCTTCCTACCCGGTTCGAAAGGAAGCTCCCGTCTGGTGCTGTGATTCAAGCAGATGTAAATATGAAAAAGACCTTGGCCCTAACCGCCATGGGTAAAGAAGGGTATGTACATTACACAGTTGACTCCTTCGCCAAGCTCAAGAACGCAGACTCTTCGCTTGCCAAGTCGGCTGTTGTCGGCACCAAGGTAGGGAACGCATTGATCCCGCCGAAAAAGTCGGGTTCATCTAAACCATTCAGCCCGGCGGAAGCCCGGAAGGTCATCGGTGCTATCCCCGGCTGGAAGACATCCAACGTGAAGAACAAAGCGTCAGCCACGTTCACCAAAGATTACCCGAACGGTGTAACTGCTACCGCATTGATCTTCCCGACTCACGTTACGTTCAATTATCCTCAAGGTGAGAACGATCACGTCGGCGACTTGTCCAAGATCCCAGCCTATATCCAACAGATCGACGAGGATCAAGCCGCACCAGTAGAAGACGGCAAAGCACTGGATGATCTGGCCAAGGCATTGAAGGGCTGGCCGAACAAGGTCCTCCCACGGGATGCTGACGAAGACAACTTCCTGCTGCGCGGGTTTGAAGATGATGACCTTCCGGCTGATGTGGAGCCAACCGCTGACGCCATCGAAGCACATGCAATCTCGATCTTCAAGAAGATGAAAAGTGTTGACAACTTCAAGAAGAGCAAGATGTACCACGGGGATAACACTTACTCCTTCTCGGCTGGCGGCACCGTGGGCTACGTGTACTTCGACGAAGATGGCGTTGGCATGGTCCGTGCAACCCCGTTCCAAGAGTCCACGCCGGGAAAGTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d1a3c2c87cf7a768ceeb549a0b24790764afb3ae78967036626a39b3821abe7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5405
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank