Protein

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Genbank accession
XQP12967.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MALVIHYTRNEDGTFDVKRYHDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVVLKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPEGITDGDTRVSDITGTSVAVYSPYTSPNNTSAPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTITFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFSATEEGIFALPNRAVSVVKGSRMATYDGYVTAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93877,82220 Da
isoelectric point:5,26792
aromaticity:0,09742
hydropathy:-0,37265

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
XQP12967.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQP12967.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9794
Central domain 232 430 200 0,6614
C-terminal 431 852 421 0,1466
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SalM-TTS6
[NCBI] 		3402120 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella gallinarum
[NCBI] 		594 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQP12967.1 [NCBI]
Genbank nucleotide accession
PV068287.1 [NCBI]
CDS location
range 18212 -> 20770
strand -
CDS
TTGGCGCTAGTAATCCACTATACCCGCAACGAAGACGGCACATTTGACGTTAAACGTTATCACGATAATCCAATGAACTTCGTCGTGAACCATGTTCCGGATGGGGTTCCGGTACGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCTGCCGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTGTCCTTAAACCGCTAGCGAAACTATTATCACCATCCGTGAAAGGGGCGTCATCTAACCTTGCGAACTCGCAGGCTGATTCCCCGAACAACAGTCTCACCGACCGTAACAACAAGGCCCGCCCATACGAGCGTAGCTACGACATCTGCGGAACGGTGCAAACTATCCCAAATAACCTTATGTCTACTTATAAGGTGTTTAACGCCGCTGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGTGGTTACCTAGACATACACCCTGAAGGTATAACTGACGGGGACACCCGCGTATCAGACATAACAGGCACGTCGGTTGCCGTGTACTCACCATATACATCGCCCAATAACACATCGGCACCCCAGGTCATGGTCGGCGACCCTATAGAGCAGGGCCTGTACATTACCGTAGAATCTAACGAAGTCGATGGCGTGGTTCTTAAAGCTCCCAACGGCCTGGGTATTTCTTTCTCTTACATGTCCGGGTACCCGTCTTTGTCCGGGAACATTGGCACAATATATGACCCAACAGGTGGTTCGGATTTTTCTGGAGTGTTGGTACCTAATGACACGTTTTCGTTGGTGTCAGCGTGGACAAATACAGACGTCGACTTGTCCGGGGGTGGGTACCAAGTGTTAAGCGTATCCGAAGGGACAATTACATTTATTGTACCTGGCGGCCTTATCGGTCGGTGGCAAGAAATAAGACCAGGTTCATTTTTTCGAGGTGACGGAGAGGCGTCGCTGCAACCGGATAACACATACGAGAAAACCTTAACCGATTGGGTGTCAATAAACCGTACCGAGGTTGAGCGCATAGTTGCCAATATCGCCGCCGCCAATGGTATGTATAAAGACAACGGCAAATCTAAAACACTAGCGTCGGTTACCGCGGAGATACAGTACCAGCTGCTTGATGAAAATAGCACCCCTTATGGGCCGATATACACTGCACAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAGGGGTCTGTGGTTGATGAAATAACGTACGTTAACTTATACGGACAAACACGTGATAACACTCCGCACTACGGCAACAGAACAACCGTACACTCGATGCGCAAGCAGACGCCGCGCGCTGCGGAGGTTAAGCAACCACAGTTACGTATGATTGCCACCGAAATGGTGTACAAATACCTCGGTAATGGTGTTTTCGAAGACACGATGACCCCTAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCACGTGACCCAGATGTTGGTGGCTTAAACCTGACAGTGCGAAACATGGATAAGTTACTTGCCGTTCAGAAAGAGATTGAAGATTATTTCGGTGACAAGCAAGCAGGGGAATTTTGCTACACGTTCGATGACTACAAAACCACTATGCAAGACATAGTTAGTACTATAGCGGACGCTATTTTCTGCACCCCATACCGGAGAGGAGCGGATATCCTTCTTGATTTTGAAAGACCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAATGGACCAGAACCTTTAACGATGCTCAGGTGTTCGATAGTCTTAAATTCTCATACATAGACCCTAAAACAAACGTTAAAGAAACAATAACAATACCAGAAACTGGTGGGGTTAAAACGGAGACCTACGATTCAAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCAGCGAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCTTTTAGCGCCACTGAAGAAGGGATCTTTGCCCTCCCAAATCGTGCCGTTAGTGTGGTTAAGGGTTCCCGTATGGCTACCTACGACGGCTACGTAACTGCGGTGAACGGCCTCACCGTGGAGCTGTCACAGCCAGTTAAGTTCACCTCCGGGGATGACCATTCTTTGGTTCTTAAACTGAGAGACGGTGGCGTCCAAAGTGTTCGTGTAGTCCCTGGTGCGCATGACCGACAAGTAATTATGACTTCTGTACCGCAGGAAGCCATTTATACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCGAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTAGACCCCGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTCGACAACGTACCGCCTTTCGGTCGTGCGTTCTCTAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
329360b0a56cc52f75c4d7d0f3aba8d348e18ebab30259d5387bc9bd322e966c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8290
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50