Protein

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Genbank accession
QSJ04202.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MNDPTEFKYPLDEYGEPYFAGSHVDAIEGMQDIKDRLEKAEADIVDNSTGSNSDIEKINGRLDKAESDIATNLSNSNTKFQTVNSRIDKAESDIETINTNQLNLDDNFKNYMGTTGWVSYAGSVASGVQTNTLYNGTELKCEIKEVRIGIEGVTPVLRYKTITYNLRNFNLGTQVAQLPAGFITKAQAFPAFGNGNMSSYRIEITKDGKMSIFGGTNDKTLPISSYWVYGQHTWIE
Physico‐chemical
properties
protein length:236 AA
molecular weight: 26204,71410 Da
isoelectric point:4,77768
aromaticity:0,09746
hydropathy:-0,55466

Domains

Domains [InterPro]
DC_2013
STR
5–233
DC_2013
G3DSA:1.20.5.340
STR
24–113
G3DSA:1.20.5.340
QSJ04202.1
1 236
Architecture
STR
STR 5-233 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB-SscS-F1
[NCBI] 		2812861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSJ04202.1 [NCBI]
Genbank nucleotide accession
MW589261 [NCBI]
CDS location
range 82535 -> 83245
strand -
CDS
ATGAATGATCCAACAGAATTTAAATATCCTTTAGATGAATATGGAGAACCATATTTTGCAGGAAGTCATGTAGATGCAATAGAAGGTATGCAAGATATAAAAGATAGACTTGAAAAAGCTGAAGCAGATATTGTTGATAATTCAACAGGAAGTAATTCCGACATAGAAAAGATAAATGGAAGATTAGATAAAGCTGAGTCAGATATTGCTACTAATTTATCTAATAGCAATACTAAATTCCAAACTGTGAACAGTAGAATAGATAAAGCTGAATCAGACATCGAAACAATCAACACTAATCAATTAAATTTAGATGACAATTTTAAAAATTATATGGGTACAACAGGTTGGGTTTCATACGCTGGTAGTGTAGCAAGTGGCGTACAAACTAATACCTTATACAATGGCACAGAATTAAAATGTGAAATAAAAGAAGTGAGAATAGGTATAGAGGGTGTCACACCAGTCTTAAGATATAAAACTATCACTTATAACCTAAGGAACTTTAATTTAGGAACACAGGTAGCTCAATTACCTGCTGGTTTTATAACTAAAGCACAAGCATTTCCTGCATTCGGTAATGGTAATATGAGTAGTTACCGTATAGAAATAACAAAAGACGGAAAAATGTCTATATTTGGTGGCACTAACGATAAAACATTACCAATAAGTAGTTATTGGGTGTACGGACAACACACTTGGATAGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0cbad0533b46a12e7a83e99b5b146a4f1f76a9308264548c58a87aa5c4b3fdb1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7968
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of vB-SscS-F1 Ji,Y. 2019-07-03 — GenBank