Protein

View in Explore
Genbank accession
UJP30413.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLAKIQFLRSTVAGKTPTTSQLADGELAINMADYAIYTKNGSSIVQLAGKGIPETNTKKLTVNGPSALNDTVTVAEGKTITFTNADLSGGMVRHITGKNALNDGWYIGSGGESNKGFLEIGTIDDGGEEIRFVSRGSGDTIRRTLKLIDSGGNTRVPGNIYIDEALGGGGSAFISKNKAYFGAGGADIYMRNTAGGATNQLTITDGGELLFQAKPIYWDGRKPTLTELGIGRVENARQLEQDNFPVITGNDNRWIKVALLKDPGSGQSRLQLMVTNGGNYGSARSSIDFIDCSARSIPSTLTSSNIRSYLQIRRLGDPSFDNTNQMRYSLVRTSEGLELWFTQRAFIGGVKVALLSIAGGAATEYYLPTGYTTSATAPEGLVESVAIRIYDEMNKPNLDDGTDGILSVAKGGTGASTASAARTNLGLGTAATRDVGTGSGQVMLVGAYGLGGKGTSYSIANARDYLKQLRTDGSQFMRNTLSTDINYGMGASFYSSVSDVHAVISVDWATGRVKVGATNDTNLNSDTGRINSQELYGTAFKPTPDDVGAVARAGDMMSGDLTISKTSPGFYLNAESGNSVIWFRYKGNETGAVWALPNTASSGEVRIRARTSGGTTGGEFSFKSDGTFTSPGDVNITSGAFNGKSVNTQYANFNNTSSSTTEQTVSISGSQHTPLLLNRQTNSNLSIGFKLSGMNMKRLGIDVNGDIRYGEAENQTQNSWLLTSDTINRWIVNFGRDINVAGVVNSTGVINSTGGFTGPVTAYDLTGVTQDLNALTLNNTEPGHIKVYTCRNMGGGDNITNKPSGVGGNFIVIVECLRKVRDTDYTNRQVLRASDNKRSWERWLTVSGTTNTWSPWRMNVVSGNDDDVSFKSVTTTTGNLNSGNDLIVANNTRVGGNLGLGGASSTKYTDKGVVIGRGSALLESTDGRVVIGSSGAGRAVELRPGGPTQTNNGIKVTATSGSGGDTAIEYAQGVKIRSNNGGALIISAKAGQSIYLRPQGDTSSTNETRIDANGSITINGNINANGTLTCTGGAVNGDLTVSGNVDITGTRLKTWGLEVDGGGTVLGGTIDVVGKANFSNELTAKTSINVMNDGNSHLFFRKADGTEKGLLYVDDPGNVTIRAKGGSGPTWNFWESGSCQFPGAISNFNGVNSTTNYPGGGIGAYLNTAGLTSRFSNGAYVSLYFQEYVGSYHQAILNVNGYGQDNSFYFRAGGDFICTRNGSFDNVEIRSDRRAKSDIKVIENALEKVEKLTGNTYELHNTSGGTTRSAGLIAQEVQEVLPEAVTQDIEADGGLLRLNYNSVIALLVESVKELSAEVKELKSQLK
Physico‐chemical
properties
protein length:1328 AA
molecular weight: 140136,59800 Da
isoelectric point:6,05878
aromaticity:0,07229
hydropathy:-0,31860

Domains

Domains [InterPro]
DC_1942
ATT
2–591
DC_1942 DC_0246
IPR030392
CHP
1233–1327
IPR030392
IPR030392
CHP
1233–1288
IPR030392 Coil
UJP30413.1
1 1328
Architecture
ATT
RBD
ATT 2-591 | RBD 646-1328
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJP30413.1
1 1328
Domain Start End Length (AA) Confidence
N-terminal 1 360 360 0,0634
Central domain 361 559 200 0,2707
C-terminal 560 1328 768 0,6438
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-360
Central
361-559
C-terminal
560-1328

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage Rpl1
[NCBI] 		2894288 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Raoultella planticola K59
[NCBI] 		1212665 Ascomycota > Pichiomycetes > Serinales > Metschnikowiaceae > Clavispora >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJP30413.1 [NCBI]
Genbank nucleotide accession
OK631812.1 [NCBI]
CDS location
range 41816 -> 45802
strand +
CDS
ATGGCTGATTTAGCAAAAATTCAATTCCTACGTAGCACAGTTGCGGGGAAAACACCTACTACAAGTCAGCTTGCAGATGGTGAACTGGCGATCAACATGGCTGATTATGCCATTTACACGAAAAATGGTTCTTCGATCGTTCAGTTAGCGGGTAAAGGTATCCCAGAAACAAATACCAAAAAATTAACAGTAAATGGGCCTAGTGCTCTTAATGATACCGTTACCGTAGCGGAAGGTAAAACTATTACTTTCACCAACGCGGATTTGAGCGGGGGTATGGTTCGTCATATCACTGGTAAAAACGCTCTTAACGATGGTTGGTACATCGGTTCTGGCGGTGAGAGTAATAAAGGGTTTTTAGAAATCGGTACAATTGATGACGGTGGTGAAGAGATCCGTTTCGTTTCCCGTGGTTCTGGTGATACTATTCGCCGTACTCTGAAACTTATTGATTCCGGTGGTAACACTCGCGTACCTGGTAACATCTATATTGATGAAGCTCTTGGCGGTGGTGGTTCTGCCTTTATTTCAAAAAATAAAGCATATTTCGGTGCTGGCGGTGCTGATATCTATATGCGTAACACGGCTGGCGGTGCGACAAATCAGTTAACGATCACTGATGGTGGTGAATTGCTGTTTCAAGCAAAACCTATATACTGGGATGGTCGTAAACCGACTTTAACCGAATTGGGGATCGGGAGGGTTGAAAACGCACGTCAGCTTGAACAAGATAATTTCCCTGTAATCACGGGGAATGATAATCGTTGGATTAAAGTTGCTCTGTTAAAAGATCCGGGTTCCGGTCAGAGTCGCTTGCAACTGATGGTGACTAACGGCGGTAACTATGGTTCTGCGCGTAGTTCTATCGACTTTATCGATTGTAGTGCTCGAAGCATTCCATCGACATTAACAAGCAGTAACATACGTTCTTATCTGCAAATTCGTCGTTTAGGGGATCCATCATTTGATAATACTAACCAGATGCGTTATAGCCTTGTTCGTACCTCCGAAGGTTTAGAACTGTGGTTTACTCAACGCGCGTTTATTGGTGGTGTTAAAGTTGCGCTGTTGTCTATCGCTGGCGGTGCTGCTACTGAATATTATCTGCCTACTGGTTACACGACTTCTGCAACTGCTCCGGAAGGGTTAGTTGAGAGCGTGGCTATTCGTATCTATGACGAAATGAACAAGCCTAACCTTGACGATGGTACTGATGGTATTCTGTCTGTTGCTAAAGGTGGTACAGGCGCAAGTACAGCCTCTGCTGCTCGCACAAACTTAGGTTTGGGTACGGCTGCAACCCGTGATGTTGGTACAGGTTCAGGACAAGTAATGCTTGTTGGTGCTTATGGTTTAGGCGGTAAGGGTACATCATATAGCATCGCAAATGCTCGCGACTATCTGAAACAACTGCGTACTGATGGTTCTCAGTTCATGCGAAATACGCTTAGTACTGACATTAACTATGGTATGGGTGCGAGTTTTTATAGCTCTGTATCAGATGTTCATGCGGTGATCTCGGTTGACTGGGCTACTGGTCGCGTTAAAGTTGGTGCAACTAACGATACTAACCTTAACTCAGATACAGGAAGAATCAACTCTCAGGAACTGTACGGTACTGCATTTAAACCAACTCCAGATGACGTAGGGGCTGTTGCTCGTGCTGGTGATATGATGTCTGGTGATCTGACGATCTCGAAAACATCGCCTGGTTTCTATTTGAATGCTGAGAGCGGAAACTCCGTAATTTGGTTTAGGTATAAAGGGAATGAAACTGGTGCTGTGTGGGCGTTGCCTAATACTGCCTCTTCTGGTGAAGTTCGCATTCGTGCCAGAACGTCGGGTGGAACGACAGGTGGAGAATTCTCGTTTAAATCTGACGGTACGTTTACATCACCTGGTGATGTAAATATCACTAGCGGCGCTTTCAACGGTAAAAGTGTCAATACTCAGTATGCGAACTTTAATAACACAAGTTCATCCACAACTGAACAAACCGTTTCTATTAGTGGTTCACAGCACACTCCGTTGTTACTGAATAGACAGACTAACTCGAACTTGTCTATCGGGTTTAAACTTTCCGGAATGAACATGAAACGTTTGGGTATTGATGTAAACGGTGATATTCGTTACGGTGAAGCAGAAAACCAGACACAAAACTCATGGCTGTTGACTTCGGATACGATAAACAGATGGATTGTTAACTTCGGTCGTGATATTAACGTTGCTGGTGTGGTTAATTCAACTGGTGTGATTAATTCAACTGGTGGATTTACTGGCCCTGTTACTGCATATGATTTAACTGGGGTAACTCAGGATCTTAATGCTTTAACATTGAACAATACCGAACCAGGTCATATTAAAGTTTATACGTGCCGTAATATGGGTGGCGGTGATAACATCACCAATAAACCTTCTGGCGTAGGTGGTAACTTTATTGTTATCGTTGAATGTCTCCGTAAAGTAAGAGATACCGATTACACTAACCGTCAAGTATTACGCGCGTCGGACAATAAACGCAGTTGGGAACGTTGGTTAACTGTTAGCGGTACTACTAACACCTGGTCACCGTGGAGAATGAACGTTGTTAGCGGAAACGATGACGATGTATCATTTAAATCTGTTACCACGACTACAGGAAACCTGAACAGTGGAAATGATCTGATTGTTGCTAACAACACTCGCGTAGGTGGCAACTTAGGGTTAGGTGGTGCTTCTTCCACGAAATACACTGATAAAGGTGTTGTGATTGGTAGAGGTAGTGCTCTGTTAGAAAGTACTGATGGTCGTGTGGTTATTGGTAGTTCTGGTGCTGGTCGTGCTGTTGAATTGCGTCCTGGTGGCCCAACTCAAACCAACAACGGGATCAAAGTAACTGCTACCTCTGGAAGTGGTGGTGATACTGCGATCGAGTATGCACAAGGGGTGAAAATTCGTTCTAATAACGGCGGGGCGTTGATTATTTCTGCTAAAGCAGGTCAATCAATCTATCTACGACCGCAAGGTGATACATCCAGCACAAACGAAACCCGTATTGATGCAAACGGTAGTATCACGATTAACGGCAATATTAACGCCAACGGTACATTAACTTGTACTGGTGGTGCTGTTAACGGCGACTTGACTGTATCAGGAAACGTAGATATCACTGGAACTCGACTCAAAACCTGGGGACTTGAGGTTGATGGCGGCGGAACTGTGCTCGGTGGAACTATTGATGTTGTTGGTAAAGCTAACTTCTCTAATGAGCTTACAGCCAAAACTTCTATTAATGTCATGAATGATGGAAATAGTCATCTGTTCTTCCGTAAAGCAGATGGTACAGAAAAAGGTCTTTTATATGTAGATGACCCAGGTAACGTGACTATTCGTGCTAAGGGTGGAAGTGGCCCTACTTGGAACTTTTGGGAATCAGGATCTTGTCAATTCCCAGGTGCTATTAGTAACTTTAATGGTGTTAATAGTACTACTAATTACCCTGGCGGCGGTATTGGCGCGTATTTAAATACCGCTGGCCTAACAAGTAGATTTAGTAATGGTGCTTATGTTTCCTTATACTTCCAAGAATATGTAGGAAGCTATCACCAAGCTATTCTTAATGTTAACGGCTATGGGCAAGATAACAGCTTTTATTTCCGGGCTGGTGGTGATTTCATATGTACCCGTAATGGTTCATTCGATAACGTCGAGATTCGTTCTGACCGTAGAGCCAAATCGGACATCAAAGTTATTGAAAATGCTTTGGAAAAAGTAGAAAAACTAACCGGTAATACTTATGAGCTTCACAACACATCCGGTGGTACTACTCGTTCTGCGGGTTTAATCGCGCAGGAAGTTCAAGAAGTTCTTCCGGAAGCAGTTACTCAGGATATTGAAGCAGACGGGGGTTTATTGCGTCTGAATTACAACTCAGTAATTGCACTTCTCGTTGAATCTGTTAAAGAGCTTTCTGCTGAGGTTAAAGAGCTTAAATCTCAACTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef10b13ad9b22e7b69a2a2842d266857ffd9e569a0d2b9b9e0d0654a1958b350
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental Klebsiella pneumoniae and Klebsiella oxytoca bacteriophages and their therapeutic applications Weber-Dabrowska,B., Zaczek,M., Lusiak-Szelachowska,M., Laczmanski,L., Owczarek,B., Orwat,F., Lodej,N., Kaszowska,M., Gorski,A. and Lobocka,M. — — GenBank