Protein

View in Explore
Genbank accession
QPB09622.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MGFSVIPDPAISGFTGPTGAAGAKGDPGVIQSINGKSAASVTLAASDVNALPSNANATLSATYMNIDKAAGNYRAYRWLTAGVSRWEAQVDDVAETGSAAGSNFRLSARSDDGSFNKTVIYARRDTGQIVFNTTTLHGSANVTSAGAIGIRDQAADPATTAGGAFIYSKGGVAYVKQADGTVIQLGAGGGGGGAVSSVNGKTGVVTLDASDVSALPTTGGALTGATTITPATGNGITVYGSTDPATYFRVTAEGHPYSNSLRATYYNLGVGDTTTPFAGGKFVLGFKNVNVLPSSDPVNGVVAYSEAGVLKVRQSDGTIVTVANNPTLAGLGGIPTSQKAAASGVASLDSTTRLPIAQIPAVVSKNEWTPQALGFQAWSVDPATLGTPTVGRTITIGRTYLTGFNITEPTTVSKLFVFAAGWAGSTAVPAARFWSGIYNESGSRVATSGTTGLSNIGPGGQESGAPTVQKDTHAGAVPFPFTGSVTLQPGRYWGAFQMSAGVATDFYYFYAQNEAANNTSVFHNLSTAFVRNAYLNSIAMGTTGMPASITKANFQLNHDQMVMAIA
Physico‐chemical
properties
protein length:566 AA
molecular weight: 57546,25390 Da
isoelectric point:7,80546
aromaticity:0,08657
hydropathy:0,01661

Domains

Domains [InterPro]
DC_1175
STR
3–191
DC_1175
DC_1175
STR
183–566
DC_1175
QPB09622.1
1 566
Architecture
STR
STR 3-566
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Spernnie
[NCBI] 		2767588 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces sp.
[NCBI] 		1931 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB09622.1 [NCBI]
Genbank nucleotide accession
MT701594.1 [NCBI]
CDS location
range 15772 -> 17472
strand +
CDS
ATGGGCTTCTCCGTAATCCCGGACCCTGCCATCTCCGGCTTCACCGGCCCGACCGGTGCGGCTGGCGCCAAGGGCGACCCCGGCGTCATCCAGTCCATCAACGGCAAGAGCGCGGCCAGTGTGACGCTCGCCGCCTCCGATGTGAACGCCCTGCCGAGCAACGCCAACGCGACGCTCAGCGCGACGTACATGAACATCGACAAGGCGGCCGGTAACTACCGCGCGTACCGCTGGCTGACCGCTGGCGTCAGCCGCTGGGAGGCGCAGGTCGACGATGTCGCCGAGACCGGCAGCGCGGCCGGCTCGAACTTCCGCCTGTCGGCCCGTAGCGATGACGGCTCCTTCAACAAGACCGTCATCTACGCCCGGCGCGACACCGGCCAGATCGTCTTCAACACGACCACCCTGCACGGTTCGGCGAACGTCACCTCCGCTGGGGCCATCGGCATCCGCGACCAGGCGGCCGACCCTGCCACCACCGCGGGCGGCGCGTTCATCTACTCCAAGGGTGGCGTCGCCTACGTCAAGCAGGCGGACGGCACGGTCATCCAGCTCGGGGCTGGCGGGGGCGGCGGAGGCGCTGTCTCCTCGGTGAACGGCAAGACCGGCGTGGTCACTCTGGACGCGTCCGACGTGAGCGCCCTGCCCACGACTGGCGGCGCCCTGACCGGCGCCACCACCATCACCCCGGCCACGGGCAACGGGATCACCGTGTACGGCAGCACCGACCCGGCCACGTACTTCCGCGTCACGGCCGAGGGCCACCCGTACAGCAACAGCCTTCGCGCCACGTACTACAACCTGGGCGTCGGCGACACCACCACCCCGTTCGCTGGCGGCAAGTTCGTCCTGGGCTTCAAGAACGTCAACGTCCTGCCGTCGTCCGATCCGGTGAACGGCGTGGTCGCCTACTCCGAGGCCGGCGTGCTGAAGGTCCGGCAGTCGGACGGCACGATCGTCACTGTCGCCAACAACCCGACGCTCGCCGGGCTCGGGGGCATACCGACCTCGCAGAAGGCTGCGGCCTCCGGTGTCGCATCGCTCGACTCGACGACTCGCCTGCCGATCGCGCAGATCCCTGCCGTCGTGTCGAAGAACGAGTGGACCCCGCAGGCACTGGGCTTCCAGGCGTGGTCCGTTGACCCGGCCACGCTGGGCACCCCCACGGTTGGTCGCACGATCACGATCGGGCGCACCTACCTCACAGGCTTCAACATCACCGAGCCGACCACGGTCAGCAAGCTCTTCGTGTTCGCTGCGGGATGGGCTGGATCGACAGCCGTACCAGCAGCTCGCTTCTGGTCGGGCATCTACAACGAGAGCGGCAGCCGGGTTGCCACCTCGGGGACCACGGGCCTGTCGAACATCGGGCCGGGTGGCCAGGAGTCCGGCGCACCCACCGTGCAGAAGGACACGCACGCTGGCGCCGTGCCCTTCCCCTTCACCGGGTCGGTCACCTTGCAGCCCGGCCGGTACTGGGGCGCCTTCCAGATGAGTGCCGGTGTGGCCACCGACTTCTACTACTTCTACGCGCAGAACGAGGCGGCGAACAACACGTCGGTCTTCCACAACCTGTCGACCGCGTTCGTCCGGAACGCCTACCTCAACAGCATCGCGATGGGCACGACCGGGATGCCGGCCTCGATCACGAAGGCCAACTTCCAGCTCAACCACGATCAGATGGTCATGGCCATCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
262c986f3c3d7d2f51fa7953e58729871120a0d27e3cb8a1beb54bac890e7c61
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6648
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Streptomyces phage Spernnie Tate,N.B., Melbern,L., Clark,J.D., Hernandez,I., Liu,M. and Burrowes,B.H. 2021 33414328 GenBank