Protein

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Genbank accession
XYM57569.1 [GenBank]
Protein name
LamG-like jellyroll fold domain-containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MADTSKLTVGTVQALSGNQLAVKIPVITGGDPDPSLGAGQLAYVDGAIRVYTGTVWQGIDEGIKPVTNGLLFWVDASNSSSFPGSGNSWFNLASSEPSSIGDLSLPSGYTYLPDGGGCFQFNGNQASSANYSAGSNGMTMEVVMYNTNSDQTSTYGRIMDWNDTTMSLGSYGSKQHRSWVWAGGGRMSGEYVVNSSATGFFDKWNHSVMTYNGSEVVGYWNGGQQFQVAKTGNMETANSPFTIGNGDNYAWYGKIAVVRVYNRGLTQAEVSQNYNSLKNKYNLGL
Physico‐chemical
properties
protein length:285 AA
molecular weight: 30480,15960 Da
isoelectric point:4,94905
aromaticity:0,11930
hydropathy:-0,35053

Domains

Domains [InterPro]
DC_1652
STR
35–285
DC_1652
G3DSA:2.60.120.200
STR
100–276
G3DSA:2.60.120.200
IPR013320
STR
107–276
IPR013320
PF13385
LEC
128–271
PF13385
XYM57569.1
1 285
Architecture
STR
STR 35-285
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH1b
[NCBI] 		3413213 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57569.1 [NCBI]
Genbank nucleotide accession
PV340850 [NCBI]
CDS location
range 105608 -> 106465
strand +
CDS
ATGGCAGACACTTCTAAACTGACCGTGGGAACGGTCCAAGCTCTATCTGGTAATCAGTTAGCAGTTAAAATTCCAGTAATTACAGGAGGAGACCCAGACCCATCATTGGGTGCTGGGCAACTCGCTTATGTTGATGGTGCTATTAGAGTTTACACTGGAACAGTATGGCAAGGTATTGACGAGGGTATAAAACCAGTTACCAATGGATTGCTATTTTGGGTTGATGCTAGTAATTCTTCTTCTTTCCCTGGAAGTGGTAATTCTTGGTTTAACTTAGCATCTTCAGAACCTTCTTCAATTGGAGATTTATCTCTTCCATCTGGATATACATACCTTCCTGATGGTGGAGGTTGTTTCCAATTTAATGGCAACCAAGCATCCAGTGCAAACTATAGTGCGGGATCAAATGGTATGACGATGGAAGTTGTCATGTACAACACTAATAGTGATCAAACATCAACATATGGTCGTATTATGGACTGGAATGATACTACCATGAGTTTAGGATCTTATGGTAGTAAACAACATAGATCGTGGGTATGGGCAGGCGGTGGTCGTATGTCTGGTGAATATGTTGTTAACTCTTCTGCAACTGGATTCTTTGATAAGTGGAATCATTCTGTCATGACCTATAACGGATCGGAAGTTGTGGGATATTGGAATGGTGGACAGCAATTCCAAGTTGCTAAAACAGGCAACATGGAAACTGCAAATTCTCCATTTACTATCGGTAATGGCGATAATTATGCTTGGTATGGAAAAATTGCAGTTGTTCGTGTTTACAACAGAGGACTAACACAAGCAGAAGTGTCTCAGAACTACAATTCACTCAAGAATAAGTATAATCTCGGTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
69834df924651bdf783907423f810862d5bbf894d0ef121c9fdaabaa8303b027
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8167
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50