Protein

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UniProt accession
D9ICX0 [UniProt]
Protein name
Long tail fiber protein Gp37
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLKAGTTIGGNTIWSQANLPLLPTGNTLTYKGFKVYTENDKPTKAEIGLGNVTNDAQVKKSGDDMTGDLTLKNNTQLTVPRRINLVADTAAVAPVLLVTRSDNNAITDPFPSSETRVYTFLANTTSNTSDPSAGAILTAHVVNQKPSGAGAMEFQVYAAPNKTTGASGRLTSKFRMSGDDGAVSLTGSSFTVGMTTTINYNLYANELISKGAGNRNVTMQDTNGNELAMLFADTGKNLYVRTGGSYVSRFAADGTLILANGLTVPRQVFVNGASLPVNNGQVRLDTSADGNAVGDGATHLGMKLEDGKYYHYFRGAGVMYIDMKGGISSSTPLYMNGVDQAIPKVEMLSTGAAGAKNFLRRFRGGLVDTIWHETVQGGDYRLATGDTDADYQLRITADGANRGGYVFGGTFTADRGNDGFKIRYKPDTESAMFQIWNRDTSVLNSYFGYGSSNQATVSLYNRLGDIGVSTPNAAFRLDNTTLTLGNSSSAEASQRAFTIRNWGDGEFRAAVFEVNDGTGYHFYSQRRSDNVVEAAFSGDLYTNGTLRAQNNIIVRGSNGLEIRSDGTRHVWFKDNAGTEKAVLYAENNGSVNLRTSNQQYSLAIADGMIRATGQPTTGDSRGLIRGAVTGGAFAAWRDRPAGLLLDCPDSYNQAYNIWKATHWGVAHLASMDVHNGSNSPMVLMHVGGGEFNFTAAGTLTVTGGIYASVNGDFNDVYIRSDIRLKSNLVELKDALSKVEQLKGYIYDKKLNVEDEEPQHREAGIIAQDLQKVLPEAVKENEDTGMLTISPSGVNALLVNAINELRERLEAIERKIGA
Physico‐chemical
properties
protein length:819 AA
molecular weight: 87959,84940 Da
isoelectric point:5,87456
aromaticity:0,08181
hydropathy:-0,33858

Domains

Domains [InterPro]
DC_1159
STR
1–374
DC_1159 IPR051577 Coil
DC_1202
STR
338–819
DC_1202
IPR030392
CHP
722–780
IPR030392
IPR030392
CHP
722–817
IPR030392
D9ICX0
1 819
Architecture
STR
STR 1-819
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
D9ICX0
1 819
Domain Start End Length (AA) Confidence
N-terminal 1 356 356 0,1624
Central domain 357 555 200 0,3347
C-terminal 556 819 263 0,8599
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-356
Central
357-555
C-terminal
556-819

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage RB16
[NCBI] 		2681599 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus RB16
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADJ55563.1 [NCBI]
Genbank nucleotide accession
HM134276 [NCBI]
CDS location
range 169821 -> 172280
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCATCGGTGGTAATACTATATGGAGTCAGGCTAACTTGCCTTTGCTCCCAACTGGAAACACATTAACGTATAAAGGCTTTAAAGTCTATACCGAAAACGACAAACCGACAAAAGCCGAAATCGGTCTGGGTAACGTAACAAACGACGCACAGGTCAAAAAGTCCGGCGACGATATGACAGGCGATCTGACGTTAAAGAACAACACACAATTGACTGTTCCGCGTCGTATTAACCTGGTTGCTGATACTGCTGCTGTAGCGCCTGTTCTTTTGGTTACTCGTTCAGACAATAACGCGATTACTGATCCGTTTCCTTCTTCTGAAACACGCGTGTATACGTTTTTGGCAAACACAACGTCGAACACCTCAGATCCGTCTGCGGGTGCTATTTTGACTGCTCACGTTGTCAACCAGAAGCCTAGTGGTGCTGGTGCAATGGAATTTCAAGTATATGCAGCACCAAATAAGACAACTGGCGCAAGTGGTCGGTTAACATCAAAGTTTAGAATGAGCGGTGATGATGGCGCGGTTTCTCTAACAGGTAGCTCTTTTACTGTTGGAATGACAACGACAATTAACTATAATTTATACGCGAATGAACTCATTTCGAAAGGGGCAGGAAACCGTAACGTAACTATGCAAGACACAAACGGCAACGAACTAGCTATGCTGTTTGCAGATACGGGTAAGAACCTGTATGTTCGTACTGGTGGTTCATATGTATCTCGTTTCGCTGCTGATGGCACTCTTATTCTGGCTAACGGCTTGACTGTTCCGCGTCAGGTATTTGTTAACGGTGCTTCACTTCCAGTGAACAATGGTCAAGTTCGACTTGATACAAGCGCTGATGGAAACGCTGTTGGTGACGGTGCAACGCATCTTGGTATGAAATTAGAAGATGGGAAATATTATCATTATTTCCGTGGTGCTGGTGTGATGTACATTGACATGAAAGGTGGAATATCTTCTTCAACCCCGTTGTATATGAATGGAGTTGATCAAGCAATACCTAAAGTTGAAATGCTATCTACTGGTGCTGCTGGTGCTAAAAACTTTTTGCGGCGGTTCCGTGGTGGTCTTGTTGATACCATATGGCATGAAACTGTTCAGGGTGGTGATTACCGATTAGCAACAGGGGATACCGATGCGGATTATCAGTTAAGAATTACTGCTGATGGTGCTAATAGAGGTGGTTATGTATTTGGTGGTACGTTTACGGCTGATCGCGGTAATGATGGATTCAAGATCCGTTATAAACCTGATACCGAATCAGCAATGTTCCAGATCTGGAACAGGGATACATCAGTATTGAACTCTTATTTCGGATACGGGTCAAGTAATCAGGCAACAGTTAGCCTGTATAACCGTTTAGGTGATATTGGCGTTTCTACTCCAAACGCGGCGTTCCGTCTGGATAATACTACGTTAACTCTTGGTAACTCTTCATCTGCGGAAGCCAGTCAACGTGCGTTTACTATCAGGAACTGGGGTGATGGTGAATTTCGTGCTGCGGTTTTTGAAGTCAATGATGGTACTGGTTATCATTTCTATAGTCAACGCAGATCCGATAACGTGGTTGAGGCAGCATTCTCCGGCGACCTTTATACCAACGGAACATTACGCGCACAGAACAACATAATTGTTCGTGGTAGTAATGGCCTAGAAATTCGTTCTGACGGAACCCGTCATGTTTGGTTTAAGGATAACGCGGGAACTGAAAAAGCAGTATTATATGCAGAGAATAACGGCAGCGTAAACCTACGTACATCAAACCAACAGTATTCTCTTGCGATTGCTGATGGTATGATCCGAGCAACCGGACAACCAACTACAGGGGATTCACGAGGTCTTATTCGAGGTGCTGTTACTGGTGGTGCGTTTGCCGCATGGCGCGATCGTCCTGCTGGTTTGTTGCTTGATTGTCCAGATTCATATAATCAGGCATACAACATATGGAAAGCGACTCACTGGGGTGTTGCTCACTTAGCATCTATGGATGTGCATAACGGCAGTAACTCCCCTATGGTACTCATGCACGTTGGTGGTGGAGAATTCAATTTTACCGCTGCTGGTACTCTTACTGTCACTGGTGGAATTTATGCTAGTGTTAACGGTGACTTTAACGATGTGTATATTCGTTCAGATATCCGGTTGAAATCTAACCTGGTTGAACTGAAAGATGCACTCAGTAAAGTTGAACAGCTTAAAGGTTATATCTACGATAAGAAACTGAATGTCGAAGATGAAGAACCACAGCATCGAGAAGCTGGTATTATTGCTCAGGATCTGCAAAAGGTATTACCAGAAGCAGTAAAAGAGAATGAAGATACTGGCATGTTAACAATATCTCCTTCTGGTGTGAATGCACTTTTAGTCAACGCAATCAACGAATTGCGTGAACGTCTGGAAGCAATCGAACGGAAAATAGGGGCGTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098024 virus tail, fiber Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0003700 DNA-binding transcription factor activity Molecular Function IEA:TreeGrafter (UniProt)
GO:0043565 sequence-specific DNA binding Molecular Function IEA:TreeGrafter (UniProt)
GO:0045893 positive regulation of DNA-templated transcription Biological Process IEA:TreeGrafter (UniProt)
GO:0016540 protein autoprocessing Biological Process IEA:TreeGrafter (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
b0c20746997cb2fe6efbbb1734b81403d0f0f5a28b9446c158fdb5de01e50980
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5568
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50