Protein

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Genbank accession
AMO42819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTKISGNQIATSTLATVDSLTFLDGESVLRLPVGTEEQRPESPAVGTLRYNSDGDTAEVYKADDGTGNPGWLEVGAGGATLGKKGIIRTNADYIDEDIEIDPSLGDEYTHAFTHGPVEIRDGFTVTVEDGADWEIWGGEPEDPPEGTVLQYFHGITPPTRYTLSANNLSDSEAVIPNLSVTITPTRSTSKIIVGAHISHNGRHVTSFGFQKDGSILTAGLPSSNNANSNYAVMTFHNGDDVANHMRQSSFTYADTSVVPGIPVTYTVCGTASWSNSVRDLFINDRDGNDMRGISTMFVMEVMGPLP
Physico‐chemical
properties
protein length:308 AA
molecular weight: 32963,92100 Da
isoelectric point:4,45984
aromaticity:0,07468
hydropathy:-0,30292

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM50
[NCBI] 		687803 Uroviricota > Caudoviricetes > Pantevenvirales > Neptunevirus > Neptunevirus srim50
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMO42819.1 [NCBI]
Genbank nucleotide accession
KU594605.1 [NCBI]
CDS location
range 28450 -> 29376
strand +
CDS
ATGGCACTTACCAAGATTAGTGGCAATCAGATTGCCACATCAACACTAGCAACGGTCGATTCTCTTACATTTTTAGATGGAGAAAGTGTTCTTCGTTTACCTGTTGGTACTGAAGAACAGAGACCAGAAAGTCCTGCTGTTGGAACTCTCAGATATAATTCTGACGGAGACACAGCAGAAGTCTATAAAGCAGACGATGGTACTGGAAATCCTGGATGGTTAGAAGTTGGTGCTGGTGGTGCTACCTTAGGAAAGAAAGGTATTATTAGAACCAACGCTGACTATATTGATGAAGACATTGAAATCGACCCTTCGTTAGGTGATGAATATACTCATGCATTCACACATGGTCCTGTAGAAATTAGAGACGGATTTACTGTTACTGTTGAAGATGGTGCTGACTGGGAAATTTGGGGTGGTGAACCTGAAGACCCCCCTGAAGGTACAGTCCTTCAGTATTTCCATGGTATAACTCCACCAACACGTTATACTTTGAGTGCCAATAATTTAAGTGATTCTGAAGCAGTAATTCCCAACCTTTCTGTAACAATTACACCAACCAGAAGCACATCTAAAATTATTGTTGGTGCTCATATTTCTCATAATGGAAGACATGTCACTTCTTTTGGATTCCAGAAAGATGGCTCTATTCTTACAGCAGGACTTCCAAGTAGCAATAACGCAAATAGTAATTATGCTGTTATGACTTTTCATAATGGGGATGATGTTGCTAATCATATGCGTCAGTCATCGTTTACATACGCAGACACTTCTGTAGTTCCTGGAATTCCTGTAACATATACTGTATGTGGTACTGCATCTTGGTCAAATAGTGTTCGTGACCTGTTTATTAACGACAGAGACGGTAATGACATGAGAGGCATTTCTACCATGTTTGTCATGGAAGTTATGGGTCCACTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d153739bbd0bd4fd5b4bf271c91d7d50562cfe6f2e982acdf2a3976e59c12197
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7185
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomic content and context of auxiliary metabolic genes in marine cyanophages Marston,M.F., Martiny,J.B.H. and Crummett,L.T. 2016-12 — GenBank