Protein

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Genbank accession
WPJ21558.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MATLKQIQFKRSKVAGVRPAPAQLAEGELAINLKDRLLFTKDDTGAIIDLGFAKGGNIDGNVIHKGNYNQTGDYTLNGVFTQIGDFNLNGIARVTRDIIAAGQIMTHGGELISKSASTSHLRFFDGDDRERGIIFSPNNAGLTNQVVNIRVQDYSTASESTYAFSGNGLFTSPEVSAWKSISSPQILTDKVITNGKKAGDYDIYSMADNSPLAESETAINHLRAMRNAVGAGIFHEVKDNDGITWYAGDGLDAYLWSFTWSGGLKAGHSIAVGLPHGSKNYSEMGPGSIALGDNDTGLKWHQDGYFFTVNNGTRTFLSGPAETTSLRKMVMGYSVNGTDLTTPPSENYALATVVTYHDNNAYGDGQTLLGYYQGGNYHHYFRGKGTTNVNTAGGLLVTPGNIDVVGGSVNIDGRNNASTLLFKGNTTGSSSVDNMTIAVWGNTFTNVDGDRKNVMEISDATSWIQYYQRLSSGAIQSHLNGTLGVNESINVGQEVNVSGTIAGNAVNALRIWNDDYAAIFRRSEGSLHIIPTAFGEGKTGDIGPLRPFSLALDTGKVSIPDLQSRYNTITANGYIKFVGHGAGAGGYDIQYAQAAPVFQEIDDDAVSKYYPIVKQKFLQGKAVWSLGTEINSGTFVLHHLKEDGTGGHTSRFNADGTVNFPDNVQVGGGEATIARNGNIFSDIWKLFSSAGDITNIHDAIASRVAKEGDTMTGRLTLNANSDAIVINSAATESGYVKGQKAGVNNWYVGNGGADNNLSFYSFQTNSGVNIHNSGEVGLAPQGADTFYFNRDRLYIKGSQWAAHQAGDWGNQWRQEAPVFVDFGNVGNDSYYPIIKGKSGITNEGYVSGVDFGMRRITNTWAQGIIRVGNQENGQDPQAIYEFHHNGVFYAPSLLKSGRVSAGGGDPAWTGPCIVIGDNDTGLVWEADGIFNAYANGQGVFSFRAGLAQTFGDVALNVNAGMYVRDNIDVNDVYIRSDIRCKSEIKLIDNAQEKSKLLGGYTYLLKNSVTDEVKPSAGLIAQEVQEVLPELVTEDKETGLLRLNYNGIIGLNTATINEHTDEIKELKSEIAELKALIKSLL
Physico‐chemical
properties
protein length:1080 AA
molecular weight: 116123,31830 Da
isoelectric point:5,33658
aromaticity:0,09444
hydropathy:-0,29898

Domains

Domains [InterPro]
DC_0538
STR
1–706
DC_0538 G3DSA:6.20.80.10 IPR030392 Coil
DC_0339
STR
615–1068
DC_0339
IPR030392
CHP
976–1069
IPR030392
WPJ21558.1
1 1080
Architecture
STR
STR 1-1069 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ21558.1
1 1080
Domain Start End Length (AA) Confidence
N-terminal 1 213 213 0,2591
Central domain 214 412 200 0,2971
C-terminal 413 1080 667 0,7966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-213
Central
214-412
C-terminal
413-1080

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalD_ABTNLS3
[NCBI] 		3093917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ21558.1 [NCBI]
Genbank nucleotide accession
OR756449 [NCBI]
CDS location
range 85847 -> 89089
strand -
CDS
ATGGCTACTTTAAAGCAAATCCAATTTAAAAGAAGTAAAGTGGCTGGTGTACGTCCGGCACCGGCCCAGTTGGCTGAAGGCGAACTGGCTATTAACTTAAAGGACCGTTTACTTTTTACTAAAGACGATACCGGAGCGATTATCGACCTTGGCTTTGCTAAGGGTGGAAATATCGATGGTAATGTTATTCATAAAGGCAATTACAACCAAACCGGCGATTATACACTTAATGGTGTATTTACTCAAATTGGTGATTTCAATCTCAATGGTATTGCTCGTGTGACTCGTGACATCATTGCGGCAGGGCAGATAATGACCCACGGAGGTGAACTTATTTCTAAGAGCGCCTCAACTTCACACCTTCGTTTCTTTGATGGTGATGATCGTGAACGTGGTATTATCTTTTCTCCAAATAATGCGGGTTTGACCAATCAAGTGGTTAATATTCGCGTTCAAGATTATTCTACTGCAAGCGAAAGCACTTATGCGTTTTCAGGCAATGGTTTGTTCACTTCACCTGAAGTATCAGCATGGAAATCTATTTCGTCTCCACAAATTCTGACCGATAAAGTTATTACAAACGGGAAGAAGGCTGGCGATTATGATATCTATTCAATGGCCGATAATAGCCCATTGGCAGAAAGTGAAACAGCTATTAACCACCTTCGTGCTATGCGAAATGCTGTAGGCGCCGGTATATTCCATGAAGTTAAAGATAATGACGGGATAACTTGGTATGCAGGCGATGGATTAGATGCCTACCTTTGGTCATTTACCTGGTCTGGTGGTTTGAAAGCGGGCCATTCTATTGCTGTAGGTCTTCCGCATGGTTCTAAAAATTATTCGGAAATGGGCCCGGGCTCAATTGCTCTTGGCGATAATGACACCGGGTTAAAATGGCACCAGGATGGATATTTCTTTACCGTGAACAACGGAACAAGAACTTTCCTTTCCGGTCCGGCGGAAACTACTAGTCTTAGAAAAATGGTTATGGGTTATTCTGTAAACGGCACTGATTTAACTACGCCTCCGTCAGAAAACTATGCCTTAGCTACTGTCGTTACTTATCATGATAATAACGCGTATGGTGACGGCCAAACACTTCTTGGGTATTACCAAGGTGGTAATTACCATCACTATTTCCGCGGTAAAGGTACTACAAACGTTAACACCGCTGGCGGTTTGTTGGTCACTCCGGGTAATATTGATGTTGTTGGCGGTTCGGTTAATATCGATGGCCGCAACAATGCATCTACCCTGTTGTTCAAAGGTAACACGACCGGAAGTAGTTCAGTTGATAATATGACTATCGCCGTTTGGGGTAATACCTTTACTAATGTTGATGGCGACCGTAAAAACGTAATGGAAATATCTGATGCCACTAGCTGGATTCAATATTATCAACGACTGTCTTCAGGTGCTATTCAAAGCCATTTAAATGGAACTTTGGGTGTAAACGAAAGTATAAATGTCGGCCAGGAAGTTAACGTCTCCGGCACTATTGCTGGTAATGCGGTCAATGCTCTTAGAATTTGGAACGACGATTACGCCGCTATTTTCCGTCGTTCAGAAGGAAGTCTTCATATTATTCCAACTGCCTTTGGCGAAGGTAAAACTGGTGATATTGGTCCACTTCGCCCGTTTAGTTTGGCTTTAGATACCGGTAAAGTAAGTATTCCAGATTTACAGTCAAGATACAATACGATCACTGCGAACGGCTATATTAAATTTGTTGGCCATGGCGCAGGCGCCGGTGGTTATGATATTCAATATGCCCAGGCCGCTCCTGTTTTCCAAGAAATTGATGATGACGCAGTAAGTAAATATTATCCTATTGTTAAGCAAAAATTCTTACAAGGAAAAGCTGTTTGGTCTTTAGGTACTGAAATTAATTCCGGGACTTTTGTTTTACACCATCTTAAAGAAGACGGGACCGGAGGTCATACCTCAAGATTTAATGCTGACGGTACAGTTAACTTCCCGGATAACGTACAGGTTGGCGGTGGCGAAGCTACTATTGCTCGAAATGGTAATATCTTCTCTGATATTTGGAAATTATTTAGCTCTGCTGGTGATATAACCAACATCCATGATGCTATTGCCTCCCGTGTGGCTAAAGAAGGCGACACGATGACAGGCCGTTTAACTCTGAATGCAAACTCGGATGCTATTGTTATTAACAGTGCTGCAACCGAATCTGGTTATGTGAAAGGACAAAAAGCAGGCGTTAATAACTGGTATGTTGGTAATGGCGGCGCTGATAACAACTTATCGTTTTATAGTTTCCAAACTAATTCAGGCGTTAATATTCATAATAGTGGAGAAGTTGGTTTAGCTCCTCAAGGGGCGGATACTTTTTATTTTAATAGGGACCGTCTTTATATAAAGGGTTCACAATGGGCTGCACACCAAGCTGGCGATTGGGGTAATCAATGGCGACAAGAAGCTCCGGTGTTTGTAGATTTTGGTAATGTTGGTAATGATAGTTATTATCCAATTATCAAAGGAAAATCTGGTATTACTAACGAAGGATACGTATCGGGTGTAGATTTTGGTATGCGACGCATTACTAATACCTGGGCACAAGGTATTATTCGTGTAGGTAACCAGGAAAATGGTCAAGACCCACAAGCTATATATGAATTCCACCATAATGGGGTTTTTTATGCTCCAAGCTTACTTAAGAGCGGCAGAGTATCGGCTGGTGGTGGTGACCCAGCATGGACTGGACCATGTATTGTTATCGGTGATAACGACACTGGATTGGTATGGGAAGCGGACGGTATTTTCAACGCGTATGCAAACGGTCAAGGTGTATTCAGTTTCCGTGCTGGGCTTGCTCAGACATTCGGTGACGTGGCCCTTAACGTTAACGCAGGGATGTATGTTCGTGATAACATCGATGTTAACGACGTTTATATTCGTTCTGATATCCGTTGTAAGTCAGAAATTAAGCTTATCGATAACGCCCAAGAGAAATCTAAACTCTTAGGTGGTTATACTTATTTGCTTAAAAACTCTGTTACAGATGAAGTTAAACCATCTGCAGGTTTAATTGCACAGGAAGTTCAAGAAGTATTACCTGAACTGGTGACTGAAGATAAAGAGACTGGCTTACTTCGTTTAAACTATAACGGTATTATCGGTTTAAATACTGCTACTATCAATGAGCATACTGACGAAATCAAGGAATTGAAATCTGAAATTGCTGAGTTGAAAGCATTAATTAAATCATTATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
543fde9f47c220f5483f16786e09a3b299ffc9a0634e61683eb45b136faca28d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2868
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50