Protein

View in Explore
Genbank accession
GENB_bc3f06e451f2 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRDLALGAYTQKDLTKKVNTIGDVTTLKTEAKTTAVGAINELKDNYEKIKNSIDTNTANFLIDQKLDPVKEDVKALHTQVDNYSINYKQSNDPTASINPTIDSATFLNTATGVIWTCIDKTKNKNRWINGNGEVAGALPSNPNLGDIGFGVGIAPKEITNKYNMYPMLGTFTPGHMNYGNYTDIHGNVMVWIPKLYIKTSNVDAAPYCGLKVEVSATQEEGFWCHRAFINNGKEIPGFFIDKYLASNQGGILGSRRNTVPLTCDSKFNSVALISGVSAKVALGNKITEDSDLDSDDLKSIKNRNSSFLEAVKNRGPEFQVLTIFAYNYLILLSKCIYQNAYNTNNFNNIEFAKSRTDRFAFIQGMNTMQSVQRDIQAIHNLDYKTAGYTDGTNALYRTGSVSDSKMGKISHNGHACGVVDLVGGLFNLAIGAMYGYILDRSYFGVIKESTNITDLDLESLVDTNNYDETTLPAEIITYINSDSDSPLGYFKDVGAKYNNTNVRTTSEYKIDSCGIPKWSVLQDATVDTTRQTFQWRGNPTYKDTLTFPIVGSSFKDSFYSSVQFQKDTQGVEFGTRCILLPEI
Physico‐chemical
properties
protein length:583 AA
molecular weight: 64561,73390 Da
isoelectric point:5,77208
aromaticity:0,10120
hydropathy:-0,36364

Domains

Domains [InterPro]
DC_0946
STR
1–583
DC_0946
Coil
Unmapped
39–59
Coil
GENB_bc3f06e451f2
1 583
Architecture
STR
STR 1-583
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_bc3f06e451f2
1 583
Domain Start End Length (AA) Confidence
N-terminal 1 419 419 0,2358
Central domain 420 572 154 0,1055
C-terminal 573 583 10 0,9948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-419
Central
420-572
C-terminal
573-583

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-13
[NCBI] 		2797315 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MW373745.1_CDS_[complement(95794..97545)] [NCBI]
Genbank nucleotide accession
MW373745.1 [NCBI]
CDS location
range 95794 -> 97545
strand -
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
9738f2869b6828e6e4b33313b9bc691534b78cb7d76b773dae78686fb0e4a92a

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,5427
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50