Protein

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Genbank accession
XYM60055.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MALVSQSIKNLKGGVSQQPDILRYPEQGAKQVNGWSSETEGLQKRPPVVLKKVLGDAGYLGSDPMVHLINRDENEQYYVVFTGSSIRVFALDGTERTVRGDFSYVTTGNPQKDLRMITVADYTFVVNTTKTVEINDGSLSNGGNFQDNVDGLINVRGGQYGRKLVVTINGTTVEHQLPSGSNATEDPPKVDAQAIAEALAVLLRAALPSWTFDVGTGYIHVQAPSGTTINEFITKDGYADQLISPVTHYAQSFSKLPLNAPDGYLVKIVGDTSKTADQYYVKYDKTQKVWKETIGWNVTTLLHFHTMPWALVRAADGQFDFSWHNWEPRKAGDDVTSPHPSLVGSQITDVFFWRNRLGFLSGENVVLSRTGRYFDLYPPSVANLSDDDPIDVAISHNRVSILKYAVPFAEELLLWSDEAQFVMSASGVLSAKSVELNLTTQFDVQDGARPYGIGRNIYFASKRATYSSVYRYYAVADVSEVKNAEDITTHIPQYIPNGIFSINGSGTENFCSVLTKGAPNKIFTYKFLYIDEQIRQQAWSHWEFPEDVRVLAADSIGSTMFLLMKNHTHSWLGQVDFTKDTTDLPNEPYRLYLDHKKEYTIPSSAYNWDTNETTVTLSSVFGMTLGGNSKLSMVEEDGKVTTWDTYGSTVRMIGDYSGKHVFFGVHIPFTYEFSKFLIKKTDEYGSTSTEDSGRLQLRRAWVNYEDSGQFTVSVQNLSRTFEYDMGGNRIGSDKLVLGKLNLGTGQYRFPVVGNARVNTVTIYSEAPTPLNIIGCGWEGNYTRRTSGI
Physico‐chemical
properties
protein length:788 AA
molecular weight: 87817,24890 Da
isoelectric point:5,60230
aromaticity:0,11421
hydropathy:-0,33604

Domains

Domains [InterPro]
IPR058003
TTP
1–788
IPR058003
XYM60055.1
1 788
Architecture
TTP
TTP 1-788
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM60055.1
1 788
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9854
Central domain 139 345 208 0,2053
C-terminal 346 788 442 0,2309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-345
C-terminal
346-788

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage TVB03
[NCBI] 		3414245 Viruses >
Host Klebsiella variicola
[NCBI] 		244366 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM60055.1 [NCBI]
Genbank nucleotide accession
PV402693 [NCBI]
CDS location
range 25561 -> 27927
strand +
CDS
ATGGCCCTTGTTAGTCAAAGTATTAAAAACCTGAAGGGAGGCGTTAGCCAGCAGCCTGACATCTTGCGTTACCCTGAACAGGGAGCCAAGCAGGTCAACGGTTGGTCCTCCGAAACTGAGGGACTCCAGAAGCGTCCACCTGTGGTGCTCAAGAAGGTCCTTGGGGACGCTGGGTACCTTGGGTCGGACCCGATGGTCCACCTCATCAACCGCGACGAGAACGAACAGTATTACGTTGTGTTCACCGGGTCGAGTATCCGGGTGTTCGCCCTTGACGGGACCGAGCGTACCGTGCGTGGTGACTTCTCGTATGTGACCACAGGTAACCCTCAGAAGGACCTGCGGATGATTACGGTTGCCGACTACACCTTCGTTGTGAACACCACCAAGACCGTTGAGATCAACGATGGAAGTCTATCCAACGGTGGTAACTTTCAGGACAACGTGGACGGACTCATTAACGTCCGAGGAGGCCAGTATGGTCGTAAGCTCGTGGTCACCATCAACGGAACAACCGTAGAGCACCAGCTGCCTTCTGGTAGTAACGCCACAGAGGACCCGCCAAAAGTGGACGCACAGGCCATCGCTGAGGCTCTCGCGGTACTTCTCCGTGCAGCCTTACCGTCATGGACCTTCGACGTTGGGACTGGCTACATTCACGTACAGGCCCCTTCTGGTACAACCATCAACGAGTTCATTACCAAGGATGGCTACGCAGACCAGCTGATTAGTCCCGTGACTCACTACGCTCAGTCGTTCTCTAAGTTACCACTCAACGCCCCTGACGGGTATCTCGTTAAGATTGTGGGTGATACCTCTAAGACTGCCGACCAGTATTACGTGAAGTACGACAAGACCCAGAAGGTCTGGAAGGAGACTATCGGCTGGAACGTAACGACCCTGCTGCACTTCCACACGATGCCTTGGGCGCTCGTAAGGGCCGCTGACGGTCAGTTTGATTTCAGCTGGCACAACTGGGAGCCACGTAAGGCTGGTGATGACGTGACTAGTCCGCATCCATCTCTGGTAGGCTCGCAGATTACCGATGTGTTCTTCTGGCGTAATCGCTTAGGGTTCCTCTCTGGGGAGAACGTGGTGCTGTCCCGTACTGGGCGATACTTCGACCTGTATCCTCCTAGTGTGGCGAACCTAAGCGATGATGACCCTATCGACGTGGCTATCAGTCATAACCGTGTGTCAATCCTGAAGTACGCAGTACCGTTCGCTGAGGAGCTTCTCCTGTGGTCGGACGAAGCGCAGTTCGTGATGAGTGCCTCTGGTGTACTCTCGGCGAAGTCCGTTGAGTTGAACCTTACGACTCAGTTCGATGTGCAGGATGGGGCGAGACCTTATGGCATCGGTCGGAACATCTACTTTGCGTCCAAGCGTGCTACCTATTCGTCTGTGTATCGTTACTATGCGGTAGCTGATGTGAGCGAGGTGAAGAACGCAGAGGACATCACGACCCACATCCCACAGTACATCCCTAACGGAATCTTCAGCATCAACGGGTCAGGAACCGAGAACTTCTGTTCAGTGCTCACCAAAGGTGCGCCCAATAAGATTTTCACCTACAAGTTCCTGTACATCGACGAGCAGATTCGCCAGCAGGCGTGGTCACATTGGGAGTTCCCTGAGGACGTCCGGGTACTGGCAGCGGACTCCATTGGGTCCACGATGTTCCTCCTGATGAAGAACCACACCCACTCATGGCTAGGTCAGGTAGACTTTACGAAGGACACCACGGACTTACCCAATGAGCCGTACCGCCTGTATCTCGACCATAAGAAGGAGTACACCATCCCTTCCTCAGCGTACAATTGGGACACCAACGAGACGACCGTTACGCTATCCAGCGTCTTCGGGATGACCCTCGGTGGTAACAGTAAGCTGAGCATGGTAGAAGAAGACGGTAAGGTAACCACGTGGGACACCTATGGTTCGACTGTGCGCATGATTGGGGATTACTCCGGGAAGCACGTGTTCTTCGGGGTTCACATCCCGTTCACCTATGAGTTCTCCAAGTTCCTCATCAAGAAGACCGACGAATATGGGTCAACCTCCACGGAAGACTCAGGGCGCTTGCAGTTGCGCAGAGCGTGGGTAAACTACGAGGACTCCGGGCAGTTCACGGTGAGTGTGCAGAACCTGTCGAGGACTTTCGAGTACGACATGGGTGGTAACCGCATCGGGTCAGACAAGCTGGTCCTCGGTAAGTTGAACCTTGGGACCGGACAGTACCGATTCCCTGTGGTCGGCAACGCTCGTGTGAACACTGTGACCATTTACTCTGAGGCCCCCACTCCGCTCAATATCATTGGGTGTGGCTGGGAGGGTAACTATACCCGAAGAACCTCAGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c654c9c58c4d779f36ac24be747bbb7fb03ec5fc2b843d16c56162bba3a7a21
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50