Protein

View in Explore
Genbank accession
ARM68522.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MELEKVAKIDLEEEAYLKPISDRGIGFYNLDKNTAQFQFRVTKDNLPLLISTNNVKGYAFFKQSTAKNGDRPSTSGVLDVEFIDPITGLIGVTVPPWFLKSVTNSTVLGEVYLSLNDYKNENKDDTVVLGTFQFEVKDSLVNQISSDIKVSYIRMFDDLRDELEKKVEQLKKDIGSTQSLVDTIKQLSATTTQAIQKAKDDSINAINTNKVDALNNIDNRTKLSIEQIDSKKNDVQSGFDVAKTAFQNSVDQNTQAFTAKVTDANNLIDKKVNDFQTNGALTKSDVDNLMSSYDWQKVALTQDNGATIPVYDLDFDNPTQITKSGFYYLYNAINGPATKQNGMLIVIYTNANYMKFIYTPYNSNEVHIRTKSGDWLPWQSINDFKDTGWINLPLVNGAYANTEYTDRNGYPCSYRIVTQNGVTTNHLRINASNLFSGQIFARLPQDMVKNAQSFSVRTPIGKPGCFLVINPTGDVLFYKSSVTGDWTEKDYIYAQVSWIN
Physico‐chemical
properties
protein length:500 AA
molecular weight: 56194,30090 Da
isoelectric point:5,11701
aromaticity:0,10400
hydropathy:-0,43600

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
9–143
G3DSA:2.60.40.3350 Coil cd19958
IPR018913
ATT
13–164
IPR018913
DC_0196
STR
20–500
DC_0196
ARM68522.1
1 500
Architecture
ATT
STR
ATT 9-164 | STR 165-500
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1365_01
[NCBI] 		1965494 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus haemolyticus
[NCBI] 		1283 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM68522.1 [NCBI]
Genbank nucleotide accession
KY653129 [NCBI]
CDS location
range 34851 -> 36353
strand +
CDS
ATGGAACTAGAAAAAGTGGCTAAAATTGATTTAGAAGAAGAAGCGTATTTAAAACCGATATCTGATAGGGGTATCGGTTTTTATAATTTAGATAAAAATACAGCACAGTTTCAGTTTAGGGTAACAAAAGACAATCTCCCTTTACTAATCAGTACAAACAACGTTAAAGGTTACGCCTTTTTCAAACAGAGTACTGCAAAAAACGGAGATAGACCTTCCACTTCTGGCGTTTTAGATGTTGAATTCATCGACCCTATAACAGGTTTAATTGGTGTAACAGTGCCACCTTGGTTTTTGAAAAGTGTTACAAACTCAACTGTGTTAGGAGAGGTTTATCTATCGCTCAACGATTATAAAAATGAAAATAAAGATGATACAGTCGTTTTAGGTACTTTCCAATTTGAAGTGAAAGATAGTTTGGTCAATCAAATTAGTAGCGATATCAAAGTGAGTTACATTCGCATGTTTGATGATTTGCGTGACGAATTAGAAAAGAAAGTAGAACAACTCAAAAAAGACATCGGTAGTACTCAAAGTTTAGTAGATACAATCAAACAACTATCTGCAACTACAACGCAAGCTATTCAAAAAGCTAAAGATGATAGTATTAACGCAATTAATACTAATAAAGTTGACGCTTTAAATAATATTGATAATCGAACAAAGTTATCAATAGAACAAATTGATAGTAAAAAGAATGACGTACAAAGTGGGTTCGATGTAGCAAAAACCGCATTCCAGAACTCAGTTGATCAAAACACACAAGCTTTTACTGCAAAGGTAACAGATGCTAATAACTTGATTGATAAAAAAGTGAACGACTTCCAAACAAACGGCGCTTTAACTAAAAGTGATGTAGATAACCTTATGAGTAGTTACGATTGGCAAAAAGTTGCGTTGACACAAGACAATGGTGCAACAATACCTGTTTACGATTTAGATTTTGATAATCCTACACAAATTACTAAATCTGGTTTTTATTACTTATACAACGCTATAAACGGACCGGCAACTAAACAAAATGGTATGCTTATCGTAATTTACACTAATGCAAATTATATGAAATTTATATACACTCCATACAATTCAAACGAGGTACACATTCGCACAAAATCGGGAGACTGGTTACCATGGCAATCGATTAACGATTTTAAAGATACAGGTTGGATAAACTTACCTTTAGTCAATGGAGCGTATGCTAACACTGAATATACAGATAGAAATGGTTATCCTTGCTCATACAGAATAGTAACTCAGAATGGTGTAACAACAAATCATTTACGTATCAACGCTAGTAACCTTTTTAGCGGTCAAATATTTGCCAGATTGCCACAAGATATGGTAAAAAACGCGCAGTCATTCTCTGTCAGAACGCCAATAGGTAAACCGGGTTGTTTTTTAGTTATCAACCCTACTGGCGATGTCTTGTTTTATAAATCATCAGTTACTGGAGATTGGACAGAAAAAGATTATATCTACGCTCAGGTAAGTTGGATAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fe86f223c3eabacc8fe71e52b71b0c80fdd66e5a0a6e223d4595d3dc37c2d825
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7933
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank