Protein

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Genbank accession
YP_453583.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MAIVNIDLDTPRPDGKPGDDARAAFSKVNSNFADVQSQITAEVSARQSAISSVQTTVATKASSSDLASEISARQSADSAISATVTAQGQAINQRALSADLTAEVAARQAADVALQTTLQAADTALGSRIDGVLSMTGRNKLLNPGFTRTSRGPGGTFSNFTTEFYTVDQWVLSGISMSGSWGRNQLNGASNTLAEGRNYFVVNITSANLASVGQKIEGVHTLAGSKATLSVWLRSTVAGKRLGFRIYQSFGTGGSPSAAVSTIITPTPLTLSTTWQKYTLTFDVPSVSGKTIGTNNNDHLYVVFDITNTDSYGGSLSGQTGQIEFAFPQLEKGSVATEFEFRAPGVEKALCEWYLKAGVVALRGNGTGSAGAGTFISHEMRAAPAITFANTIYYYNCSGINYASYPTGVEVLVNATGTFAFYSTYIMSAEL
Physico‐chemical
properties
protein length:431 AA
molecular weight: 45290,85190 Da
isoelectric point:5,99188
aromaticity:0,08817
hydropathy:-0,05545

Domains

Domains [InterPro]
DC_0568
STR
1–431
DC_0568
G3DSA:2.60.120.260
STR
158–341
G3DSA:2.60.120.260
IPR008979
STR
180–285
IPR008979
YP_453583.1
1 431
Architecture
STR
STR 1-431
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage OP1
[NCBI] 		2994040 Uroviricota > Caudoviricetes > Xipdecavirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_453583.1 [NCBI]
Genbank nucleotide accession
NC_007709.1 [NCBI]
CDS location
range 20973 -> 22268
strand +
CDS
ATGGCAATTGTGAACATCGACTTAGATACACCTCGTCCAGATGGAAAACCTGGGGACGACGCTCGTGCGGCATTCAGCAAGGTTAATTCAAACTTCGCGGACGTCCAATCCCAGATCACTGCCGAAGTGTCTGCCAGGCAGTCAGCAATATCTTCTGTGCAGACCACAGTGGCAACAAAGGCTTCCTCCTCTGACCTTGCCTCAGAGATTTCGGCCAGGCAGAGTGCCGACAGTGCCATCTCCGCCACGGTCACAGCACAAGGGCAGGCTATCAACCAGCGCGCACTCAGTGCCGATTTGACGGCTGAGGTCGCCGCAAGGCAGGCCGCGGACGTGGCACTACAGACCACACTACAGGCCGCAGATACTGCTTTGGGATCCCGCATTGATGGCGTTTTGTCCATGACTGGTCGTAACAAATTGCTGAACCCAGGATTTACTCGGACGTCTCGTGGCCCAGGTGGAACCTTCAGCAATTTTACGACTGAGTTCTACACCGTTGATCAGTGGGTGCTCAGTGGCATCAGTATGTCCGGTAGCTGGGGACGTAATCAACTAAACGGCGCAAGCAATACATTGGCAGAGGGTCGCAACTACTTTGTCGTGAATATTACTTCCGCCAACTTGGCATCTGTAGGACAAAAAATTGAAGGTGTGCACACTCTCGCGGGCAGCAAGGCAACACTCAGTGTGTGGCTGCGCTCTACCGTGGCAGGCAAGAGATTAGGTTTCCGAATCTACCAATCCTTCGGCACAGGTGGTAGCCCATCTGCGGCTGTTTCGACGATTATCACACCCACGCCCCTTACGTTGTCCACGACCTGGCAAAAGTATACGCTGACTTTTGATGTGCCTTCCGTATCGGGTAAGACCATTGGAACGAACAACAATGACCACCTGTACGTGGTGTTTGACATTACAAATACCGATAGCTATGGCGGTTCATTATCTGGCCAGACTGGTCAAATTGAGTTTGCTTTCCCGCAGCTGGAAAAGGGATCTGTTGCGACGGAGTTTGAGTTCCGCGCACCCGGCGTGGAGAAGGCACTGTGCGAGTGGTATTTAAAGGCTGGGGTTGTTGCTTTGCGGGGAAACGGGACAGGGAGTGCTGGTGCAGGTACGTTTATTTCGCACGAGATGCGTGCAGCACCTGCGATCACATTTGCGAACACAATCTACTATTACAACTGCTCTGGTATCAACTATGCATCATATCCCACTGGCGTAGAGGTGTTGGTTAATGCTACAGGGACGTTTGCCTTTTATTCGACATATATTATGTCGGCGGAGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
71a6d801edf425ef813cd08cdb550bde52d54a4f9b88c2cdb94e947d11e4dfdb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8700
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage OP1, lytic for Xanthomonas oryzae pv. oryzae, changes its host range by duplication and deletion of the small domain in the deduced tail fiber gene Inoue,Y., Matsuura,T., Ohara,T. and Azegami,K. 2006 — GenBank