Protein

View in Explore
Genbank accession
BBI55063.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,58
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MATENGFFTNQTQFQNDPNVSQRDNLKGFYGTAVRPAYVEDLVAKAEEAAAKSYEYSQNSKQYRDEAEVIRDETQAINDQTDQVYSDTVQVYNDTVGVYNDTVVQANNAAQSATDAAQHEAGAANSAVIAAGFAADAEAAFDNFNDLYLGAKPVDPTTDNDGNPLQVGATYWNSTTHDLRFWSGATWDVPEQTAIQAANTAVSASDNAQVSATNAATSETNAAQSAANALSSENAASTSASNAATSETNAATSANNAATSESNAATSASNASTSEANAAQSAADAQQSADDAANTLSELEWKQFVRNEATLNQMREQNKSVRAASGFDHYGVHNDNNTNIFNINEGMYAYIAEPSVLHLGRDTTGTKMGTSLTDYPVTCIAGIVSELLGTNQGAVNTPSSVQIKFPEAPDGTVTYNSATGEVIQHADAATAFALADTSDDIEVVINRVDMFGAEFFLEEVSQANPFVYPKGMIQSQATSMNGITTTTSNRPVTYYAVYDGDTGSQGRGVDFWAATDEQKKALVSDETNNIFMLDDGRLVQWRMRQRTIAGAGNGDWDRDGQSINPVFKSRYGLTAGRGGSVPQGYNDTIPVYGTAYWTPPNGTTNWNVDNTNNGVYQASGGYGGAPFGGMFGLCFFHVWGVVPRLNQGAYHPSFNPLGASLFEGLNTNGSYWYEGNAPEVSNSLDCFTKTSVYTGDGLPNSGSIGGVSGREDGKFYDAIYASGQGGVIDYRLPSWDMSSKEEASKVFQKVVNGSYRGEEELIRTRVFGGVTPSDKATFSGYAQVRFPAGTVAVDFPLFQTATGVRVGGHFVDASGNIFVISGISANSGGYDTVYFDTASGIHSDNINITGACYVVPIEELASSVSGEFTMVDVIGNPAEILATPALANGWLGGWIPVIPDDVNQQYPLTRKDISGNPEGQKTTNNGTSWGTDGLSGFNSTTNSNPAYYFSSTVVVVNYTAFAKQTKSSVKKKVLNAYEGIGNVWATSGYGRDKDWGVLLQESLTGKVGVSDKTDDLAYQFTLSRVSIHSALHIVDDSVGRKPAHSPLTITPPSNNSNGVKSLWYQTANNQQASLNFAWNELVWFSSTTTSRTGTSSEPYTQGTIYYITGGNHAGKILKCVADVTLTLDSYYTGSDGTLWQLNGNPVSQLITYNGAQDGWGDDSTIRITNDTSTYTNLNGDTCLYGTAELAVPYGYTKNQARAGEQTEGVDL
Physico‐chemical
properties
protein length:1211 AA
molecular weight: 129129,69380 Da
isoelectric point:4,44875
aromaticity:0,09992
hydropathy:-0,40966

Domains

Domains [InterPro]
DC_1387
STR
53–1211
DC_1387
Coil
Unmapped
282–302
Coil
BBI55063.1
1 1211
Architecture
STR
STR 53-1211
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage KIT05
[NCBI] 		2508208 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI55063.1 [NCBI]
Genbank nucleotide accession
AP019417.1 [NCBI]
CDS location
range 9912 -> 13547
strand +
CDS
ATGGCTACAGAAAACGGTTTCTTTACAAACCAAACACAATTTCAGAATGACCCTAACGTATCTCAACGAGATAACTTAAAGGGTTTTTATGGTACTGCTGTTCGTCCAGCTTACGTTGAGGATTTGGTTGCTAAGGCAGAAGAAGCCGCAGCCAAGTCATACGAATACAGCCAAAACTCTAAACAGTATAGAGATGAGGCTGAAGTTATTCGTGATGAAACTCAAGCTATCAATGACCAAACAGACCAAGTCTATAGTGATACTGTACAAGTGTACAATGACACAGTAGGCGTATATAACGATACAGTAGTACAAGCTAATAATGCTGCACAGAGTGCTACTGACGCTGCACAACATGAAGCAGGGGCTGCTAATTCTGCTGTTATCGCTGCTGGTTTTGCTGCTGATGCAGAGGCTGCATTTGATAACTTCAATGACTTGTATCTTGGTGCTAAACCAGTTGACCCTACAACTGATAATGATGGCAATCCACTACAAGTAGGTGCTACTTACTGGAACTCTACAACACATGACCTACGTTTCTGGAGTGGTGCTACTTGGGATGTACCAGAACAGACAGCTATCCAAGCTGCTAACACTGCTGTATCGGCTAGTGATAATGCTCAAGTGTCAGCTACAAATGCTGCTACTAGCGAAACAAATGCTGCTCAATCGGCTGCTAATGCACTATCAAGTGAAAATGCGGCATCTACTTCAGCTAGTAATGCTGCAACCTCTGAAACGAATGCAGCAACAAGTGCTAATAATGCAGCTACTTCAGAGTCAAATGCAGCTACGTCAGCTTCTAACGCTTCTACAAGTGAGGCTAACGCAGCACAAAGTGCAGCAGATGCTCAACAAAGTGCTGATGATGCAGCTAATACTCTGTCAGAACTTGAATGGAAACAGTTTGTACGTAATGAAGCTACTTTGAACCAAATGCGTGAGCAGAATAAATCTGTTCGTGCTGCTAGTGGATTTGACCACTATGGTGTACATAACGACAATAATACAAACATCTTCAATATTAATGAAGGTATGTATGCCTATATAGCAGAGCCTAGCGTTCTACACCTTGGTCGTGATACAACAGGGACTAAGATGGGCACATCGTTGACAGATTACCCAGTCACATGTATAGCTGGAATTGTTTCAGAACTTCTCGGTACAAACCAAGGTGCTGTTAATACTCCTAGTTCTGTTCAGATTAAATTCCCAGAAGCTCCTGATGGTACTGTAACATACAACTCTGCCACAGGTGAGGTAATTCAACATGCTGATGCAGCTACTGCTTTTGCACTGGCAGATACTTCAGATGATATTGAAGTAGTTATTAACCGTGTAGATATGTTTGGTGCTGAGTTCTTCTTAGAGGAAGTATCCCAAGCTAACCCTTTTGTTTACCCAAAAGGAATGATTCAATCCCAAGCTACTTCGATGAATGGTATTACTACAACCACATCTAATCGTCCTGTTACTTACTATGCAGTGTACGATGGCGATACTGGTTCACAAGGTCGTGGTGTAGATTTCTGGGCAGCTACTGATGAACAGAAGAAAGCATTGGTATCTGATGAAACCAATAACATCTTCATGTTAGATGATGGTCGTTTGGTTCAATGGCGTATGCGTCAACGTACTATTGCAGGTGCTGGTAATGGTGATTGGGATAGAGATGGTCAATCAATCAACCCTGTATTTAAAAGTCGTTATGGATTGACAGCTGGACGTGGTGGCTCGGTTCCTCAAGGATATAACGATACAATTCCTGTCTATGGTACTGCTTACTGGACGCCGCCAAACGGTACTACAAACTGGAATGTTGATAATACTAACAATGGTGTCTATCAGGCATCAGGAGGTTATGGCGGCGCGCCTTTTGGTGGTATGTTCGGTCTATGTTTTTTCCATGTATGGGGTGTGGTTCCTCGTTTGAACCAAGGTGCATATCATCCTAGTTTTAACCCTTTGGGTGCTTCTTTATTTGAAGGACTAAATACTAATGGCTCTTATTGGTATGAGGGTAATGCTCCTGAAGTAAGCAACTCTCTTGATTGTTTCACTAAAACATCTGTATATACAGGAGACGGTTTACCTAACTCTGGAAGTATAGGTGGAGTATCGGGCCGTGAGGATGGTAAGTTCTACGATGCTATCTATGCTTCAGGCCAAGGTGGTGTAATTGATTACCGTCTCCCTTCTTGGGATATGTCTTCTAAAGAAGAAGCCAGTAAGGTATTCCAGAAAGTAGTAAATGGCAGTTATCGTGGTGAGGAAGAGTTAATACGCACTCGTGTATTTGGTGGCGTCACCCCAAGTGACAAAGCAACATTTTCTGGTTATGCTCAGGTACGATTCCCCGCAGGAACGGTAGCTGTGGACTTCCCGCTATTCCAAACAGCAACAGGTGTTAGAGTTGGTGGTCATTTCGTTGATGCGTCTGGAAATATTTTTGTGATTTCTGGTATAAGCGCAAACTCTGGGGGTTATGACACCGTTTACTTTGATACTGCATCAGGCATTCACTCAGACAACATCAATATCACTGGCGCATGTTACGTTGTCCCAATTGAAGAGCTTGCATCATCTGTATCAGGTGAGTTCACAATGGTTGATGTGATTGGTAACCCTGCTGAGATTCTAGCAACACCTGCTTTAGCTAATGGATGGTTAGGTGGTTGGATTCCTGTTATTCCTGATGATGTAAATCAGCAATACCCACTAACTCGTAAGGACATTAGTGGCAACCCAGAAGGACAAAAGACTACGAACAATGGTACATCTTGGGGTACTGATGGTCTGAGTGGGTTTAACTCAACAACTAACTCGAATCCTGCCTATTACTTTTCATCTACAGTTGTAGTAGTTAACTACACAGCCTTCGCCAAGCAGACTAAGAGTTCTGTTAAAAAGAAAGTCCTGAATGCTTATGAAGGTATTGGTAACGTTTGGGCTACAAGTGGTTATGGTAGAGATAAAGACTGGGGTGTATTGCTTCAAGAGTCTTTGACTGGAAAGGTTGGCGTAAGCGACAAGACAGACGACTTAGCTTATCAGTTTACTTTGTCTAGAGTTAGCATTCATTCCGCATTGCATATTGTTGATGACTCAGTAGGCCGTAAGCCAGCTCACAGCCCTTTGACTATTACACCCCCTAGCAATAATAGTAATGGTGTTAAGTCATTATGGTATCAAACAGCTAACAATCAACAGGCATCCTTAAACTTTGCTTGGAATGAGTTGGTTTGGTTTAGTTCGACTACTACATCCCGTACAGGCACATCTAGTGAACCCTACACTCAAGGCACTATCTACTACATTACAGGCGGTAATCACGCAGGTAAGATTCTAAAGTGTGTTGCAGATGTCACACTCACGTTAGATTCCTACTACACTGGCTCCGATGGTACGCTATGGCAATTAAATGGCAATCCTGTTTCGCAACTAATTACATATAATGGGGCGCAAGATGGATGGGGCGACGACTCAACAATCCGCATTACCAATGATACAAGTACATATACCAACTTGAATGGTGATACCTGTCTATATGGTACTGCTGAGTTAGCTGTCCCATACGGCTACACTAAAAACCAAGCAAGAGCCGGTGAACAAACTGAAGGTGTTGATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9adb3969c276449bc1e2177a182142f982d84ba10e0a9c85ec85864e53ae4eab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio parahaemolyticus bacteriophage KIT05 Vo,T.T.A., Pham-Khanh,N.H. and Kamei,K. 2022-06-15 — GenBank