Protein

View in Explore
Genbank accession
AHV82236.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,51
Protein sequence
MSSTSTGKQPLLIDRPLFDSVRVTTQVAGASNTLSVQGGQAPAILVDMDANLSEDNNSGGVIDSITIVRNDAYRSVDYSVSSGTSGTPISFVSGQIAQIVSTGILTGGGAPYAGVGFYTYTGSGTLTGVNTAVAYSTGVASGFRFEGTIYAAQPAVNFIFYQTRGTTTPIPASGDYKVLFTKQVPANTQQVDCSDVMPILATPVVSAGNTNGLGETAPLRNKGIYMERGDRVYVGVFAEGPAASGYVPGAHVYAQGGFY
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26690,39830 Da
isoelectric point:4,85629
aromaticity:0,09266
hydropathy:0,05483

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHV82236.1
1 259
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0754
Central domain 11 209 200 0,0300
C-terminal 210 259 49 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-259

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-EIVl
[NCBI] 		1468179 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHV82236.1 [NCBI]
Genbank nucleotide accession
KJ410740 [NCBI]
CDS location
range 66674 -> 67453
strand +
CDS
ATGAGCTCGACATCCACGGGGAAGCAACCCTTACTAATCGACCGGCCGCTATTTGATTCGGTTCGAGTCACTACACAGGTTGCTGGCGCATCCAATACTTTGTCTGTACAAGGTGGACAGGCTCCGGCCATCCTGGTGGACATGGACGCCAACTTGAGTGAAGACAATAATAGTGGTGGAGTTATTGATTCGATTACCATCGTGCGTAACGATGCTTACCGTAGCGTTGACTACAGTGTAAGCTCTGGTACCTCTGGTACGCCTATCAGTTTTGTCAGTGGACAAATCGCACAGATTGTAAGCACAGGCATTCTTACTGGCGGTGGGGCTCCTTATGCAGGTGTTGGGTTCTATACATATACAGGTTCCGGAACCCTTACCGGTGTTAATACTGCTGTTGCATACTCAACAGGAGTAGCATCCGGCTTCAGGTTCGAAGGCACAATCTATGCTGCACAACCAGCCGTAAACTTCATCTTCTATCAGACCCGTGGCACCACAACCCCTATCCCGGCCAGTGGCGACTACAAAGTGCTGTTCACCAAACAAGTTCCGGCTAACACCCAGCAGGTAGATTGTTCTGATGTGATGCCAATCCTTGCCACCCCCGTTGTTTCTGCTGGTAATACCAACGGCCTAGGCGAGACTGCTCCCTTACGTAATAAAGGTATTTACATGGAGCGGGGCGACCGTGTTTACGTGGGTGTGTTTGCGGAAGGTCCGGCAGCTTCTGGTTATGTTCCAGGGGCTCATGTTTACGCACAAGGTGGATTCTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
65c6a79cf60d0cb5637ee99aceb736fbcf1b3072d4a1410e1332e054ba8ed63a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50