Protein

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Genbank accession
WVX90460.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYQKGTASSHTDLLVKLHTFATANGWTAQKNEESGGERELVLKSTGTGGNDSIVLAFRTNTLQASDTYNIRCRVSAAYVTSAFDNITGASPESVMYAWNADMEYYFIVSKERILILFTVSGVSQYYYGGNLQVYTSRGHWVSPLCCFGVGTSNTARWSEQGNDFSGWQYIRGSNPNHLLDDTGVWTKPDYLFPNMDTALTGNMRAYDNGDIPLLPMFVRTAARGIVGELHGAFGCGGFGVSHGQELTHSSGRRFVILQNVYRAGTTDYMAMELS
Physico‐chemical
properties
protein length:275 AA
molecular weight: 30227,39760 Da
isoelectric point:5,95681
aromaticity:0,12000
hydropathy:-0,24218

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX90460.1
1 275
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0457
Central domain 11 209 200 0,0030
C-terminal 210 275 65 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-275

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VpP1 MP
[NCBI] 		3113659 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX90460.1 [NCBI]
Genbank nucleotide accession
OR873633 [NCBI]
CDS location
range 858 -> 1685
strand -
CDS
ATGGCATATCAAAAGGGTACAGCTAGCAGTCACACAGACCTGTTAGTAAAACTCCACACGTTCGCTACGGCGAACGGGTGGACAGCGCAGAAGAACGAAGAGTCAGGGGGCGAGCGGGAGCTCGTTCTCAAGTCCACTGGTACGGGTGGTAACGACTCAATCGTACTGGCGTTCCGCACTAACACACTACAAGCATCCGACACTTATAACATACGCTGCCGTGTGTCCGCTGCGTACGTTACGTCTGCGTTTGACAATATAACGGGCGCGTCCCCAGAGTCAGTAATGTATGCGTGGAACGCAGACATGGAATACTACTTTATTGTTAGTAAAGAGCGAATCCTGATCCTGTTTACGGTATCAGGCGTCTCTCAGTACTACTACGGTGGTAACTTGCAGGTGTATACATCACGCGGTCACTGGGTGAGCCCGCTTTGCTGCTTTGGGGTTGGGACTAGTAACACAGCCCGCTGGTCAGAACAGGGCAACGACTTCTCCGGGTGGCAGTACATCCGAGGGTCGAACCCGAACCACTTACTGGATGACACAGGCGTGTGGACTAAACCTGACTACTTATTCCCAAACATGGACACGGCACTTACTGGTAATATGCGTGCCTACGACAATGGCGACATACCACTGCTGCCGATGTTCGTCCGAACGGCTGCTCGTGGCATTGTGGGAGAGCTTCACGGTGCCTTCGGGTGCGGCGGGTTTGGTGTTTCCCACGGGCAAGAATTAACGCACTCCTCTGGCAGACGGTTCGTTATCCTACAGAATGTCTACCGTGCTGGAACTACAGACTACATGGCTATGGAGTTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1360d6cda11617b68258c638f05f9ca5fb7d0c62129f5275ce410ca8b2bba39f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50