Protein

View in Explore
Genbank accession
CRN12731.1 [GenBank]
Protein name
Phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MLNNLNQPKGSTIGVLKDGRTTQEAIDELTNDVTGSITTTRYASSASQALFPKLIDKMTAYRHGVAGFQDKFRIYGYGSSVGNGATIGGNASPNTPVAKFFEHFQRTVNKAGIYPFEYSNKSVDGSNINDFLNREWPATEATGVFPDLAVFAYGMNDFPSAQYNAGMTFGPNGFKQRLRDAIQKVRDRGGDVVLLTTPHPNIEEYAWDLHPGIDMIWPQFAAKPVANETLIPPVSQSNVSFDFMGKRITQGVRFLRGNDAMREVAVEMGCVLIDVEKYWFEAVGKYGNALLFDRVPAIQTVHPNLLGHQQSYWRAIEEFFNNVDSSGWIAPDARLNHTLDVGGNALNPAKMEADVDLQANGIRQRAFVRRDKSGRIMEELMQDSKVKRTAYTVAEPTVSAPGYSLTWNEWFSRTKGLFSNGETLTIPITNRTEGRLLVNLWTSAQQTWTQLEDYLVSNREGVVQLVKVGGIDTTSTPGQRMFTVSTTTNGVVITVLQDNSTLKFKLDTFGL
Physico‐chemical
properties
protein length:511 AA
molecular weight: 56677,14090 Da
isoelectric point:6,22077
aromaticity:0,10176
hydropathy:-0,33483

Domains

Domains [InterPro]
DC_1636
ATT
1–70
DC_1636 SSF52266 DC_1009
IPR036514
STR
73–324
IPR036514
cd00229
ENZ
74–223
cd00229
SSF52266
STR
81–316
SSF52266
IPR013830
ENZ
105–309
IPR013830
CRN12731.1
1 511
Architecture
ATT
STR
RBD
ATT 1-70 | STR 71-324 | RBD 325-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_KpV289
[NCBI] 		1671396 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CRN12731.1 [NCBI]
Genbank nucleotide accession
LN866626.1 [NCBI]
CDS location
range 35977 -> 37512
strand +
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACCACCCAAGAGGCTATCGACGAACTTACCAACGATGTGACTGGAAGCATAACAACGACTCGATACGCTTCAAGTGCCTCTCAGGCGCTATTCCCAAAGTTAATCGATAAGATGACAGCGTACCGTCACGGAGTAGCTGGGTTCCAAGATAAGTTCCGCATCTATGGATATGGCTCCTCTGTAGGTAACGGGGCAACCATTGGTGGTAACGCATCACCAAACACCCCTGTGGCTAAGTTCTTTGAGCACTTCCAGCGCACAGTCAATAAGGCTGGAATATACCCGTTTGAATATTCCAACAAGTCGGTTGATGGGTCAAACATTAACGACTTCCTGAACCGGGAGTGGCCCGCTACGGAGGCAACTGGAGTATTCCCGGACCTCGCTGTATTTGCCTACGGCATGAACGACTTCCCGTCCGCTCAGTACAACGCAGGGATGACGTTTGGCCCCAACGGGTTCAAGCAGCGCCTCCGCGATGCTATCCAGAAGGTTCGCGACCGAGGCGGTGATGTTGTACTCCTGACTACCCCTCATCCAAACATTGAGGAGTACGCTTGGGACCTTCATCCGGGAATCGATATGATTTGGCCCCAGTTCGCTGCCAAGCCAGTAGCCAATGAGACCCTTATTCCACCAGTCTCTCAGTCCAACGTATCGTTTGACTTTATGGGTAAGAGGATAACCCAAGGGGTACGATTCCTTCGTGGTAATGATGCTATGCGAGAAGTTGCTGTTGAGATGGGCTGTGTGCTGATTGATGTCGAGAAGTATTGGTTCGAGGCTGTGGGTAAATACGGCAACGCATTACTATTCGACCGAGTTCCAGCTATACAGACCGTCCACCCCAACCTTCTGGGACACCAGCAGTCGTACTGGCGAGCTATTGAAGAGTTCTTCAACAACGTGGATTCATCTGGGTGGATTGCGCCAGACGCACGCTTGAATCATACCTTGGATGTCGGCGGCAATGCGCTTAACCCCGCCAAGATGGAGGCCGATGTGGACCTTCAGGCTAACGGCATTCGCCAACGGGCATTCGTCCGCAGGGATAAGTCAGGGCGCATCATGGAAGAGTTGATGCAGGATAGTAAGGTCAAGCGTACAGCATACACGGTAGCTGAACCTACAGTATCTGCTCCGGGGTATAGCCTAACGTGGAACGAGTGGTTCAGCCGTACCAAGGGGTTATTCTCTAACGGCGAGACATTGACTATCCCAATCACGAACAGGACCGAAGGTCGTCTTCTGGTGAACCTGTGGACGTCGGCCCAGCAGACTTGGACTCAGCTTGAAGACTACCTAGTGTCTAACCGAGAGGGAGTTGTACAGCTGGTTAAAGTTGGTGGAATAGACACTACGTCTACTCCCGGACAAAGGATGTTCACTGTATCAACCACGACAAACGGTGTGGTGATTACTGTCCTGCAAGACAATTCCACATTGAAATTCAAACTGGACACCTTTGGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b404b8c7621aba7337e29c523dff4261c87aae3cc2187a8a87ee94d46dc80d19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6496
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of novel T7-like virus vB_KpnP_KpV289 with lytic activity against Klebsiella pneumoniae Volozhantsev,N.V., Myakinina,V.P., Popova,A.V., Kislichkina,A.A., Komisarova,E.V., Knyazeva,A.I., Krasilnikova,V.M., Fursova,N.K. and Svetoch,E.A. 2016 26577901 GenBank