Protein

View in Explore
Genbank accession
WNO49056.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MATLLLIENAFRPDANPRQEPVRAGERISSMLRRIGYLKGRGAKAVRKVPFIVVRNGEPVLIAQMSTRIKAKDHISVIHLPKGGGGGSNPLQMVLTVAIAVAAAYTGGLAATAFGSQLAGAAVSAAVMIGGTLLLNMFFPPQMPSAMSLNREKASPTYSISSQGNQARLMEAIPVLYGRFRTFPDLASAPYTESRGNETYLYQLFCITQGQMDIETIQVENDNVSTYGEIEYQIVNPGQSVTLFPDNVISSPAVNNFELTPPEQPGNIKGPFAVSNPGVQVNYIGIDLYLPGGAYYMNDKGRFETSRVNVQFEYQAINDAGVPSGNWMPLFSKEYAFATNTPQSISEKIEVPLGRYQVRGYRTTAGPADNREINVIQWAVMRGYAPSVRQYGDVTLLAMIIKATNNINQQTARRINVIGTRKLPVWDPVNGWSVNPVATTNPAWAAADILRNTTYGRRLPTSRINIQELYRLSQVYQTRGDEFNGVFDTTSQLWDALTKVLRAGRTVPINYAGLIDFVRNEPKTVPTYMFQPQNMVENSFSTEYAFAEPGSTPNYVQVEYINRETWVSETVDCVLPGVAPTIPAKVQLMGVTSRAQAWREGMSLAAANRDQRRQISFSTGFEGYLPRFGDLVQISHDVPQWGYSGEVLGLNAGPDSEEYGLQGELTTTEELVFVPGLTHQIAFKKRDGSPHGPFNVVPHPSGLYNKAIVQATVAQLQQIYISDGFREELTQYQFGPTERRGLRAIALSATPDSDGKVLLTFTNYAESVHAAENGGVTPPPGPDSNLPGIVTVPIIDSVKLELTPYAWQQLIVATPARGARLYEYEISQDGLNWSNLGTATSPSMQVNLSGGTWFVRVRAIGNLTGPWTTWTGVVEASTLPASRVDHVSITSVVFGIDLEWAVREDDYLAASVEVYWGTTNVLGNATRLIDMPLPGNKFSVTDLGPGAVRYFWFRAIDEAGRVGPWYNNGVGLMGKSSDQADIIMAYLDGKITETQLAQSLIEKIDSGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNDGVLESQVLVLADRFAVGRSDDATGTFKSMFIIDNGNVYIDTAFIKNGTITNLMIGDIIQSNDYVAGVSGWRLHKGAQGFEMNGTGNGYRVRLTNTGLYVWNTNTGVLCVEVGLLT
Physico‐chemical
properties
protein length:1165 AA
molecular weight: 126823,95810 Da
isoelectric point:5,45219
aromaticity:0,09185
hydropathy:-0,13416

Domains

Domains [InterPro]
DC_0129
STR
1–1111
DC_0129
NF040662
Unmapped
279–770
NF040662 IPR015406
IPR055385
ATT
280–382
IPR055385 IPR032876 IPR053171
WNO49056.1
1 1165
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-279 | ATT 280-382 | STR 383-491 | ATT 492-641 | STR 642-1111 | RBD 1112-1137 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNO49056.1
1 1165
Domain Start End Length (AA) Confidence
N-terminal 1 646 646 0,8249
Central domain 647 1108 463 0,0469
C-terminal 1109 1165 56 0,7755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-646
Central
647-1108
C-terminal
1109-1165

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage ehaak_LB5
[NCBI] 		3076822 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Achromobacter sp.
[NCBI] 		134375 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO49056.1 [NCBI]
Genbank nucleotide accession
OQ817833.1 [NCBI]
CDS location
range 16636 -> 20133
strand +
CDS
ATGGCAACCCTGCTGCTGATTGAAAACGCTTTCCGCCCAGACGCGAATCCCCGGCAAGAGCCGGTCCGCGCCGGCGAGCGTATCAGCTCCATGCTGCGCCGTATCGGCTACCTGAAGGGCCGCGGTGCGAAAGCGGTGCGTAAAGTCCCGTTCATCGTCGTTCGAAACGGCGAACCGGTCCTTATTGCCCAAATGTCTACGCGCATTAAGGCTAAGGACCATATCAGCGTCATTCACCTGCCAAAGGGCGGTGGTGGCGGGAGCAACCCGCTTCAAATGGTGTTGACGGTGGCTATTGCTGTCGCGGCTGCCTATACTGGCGGTTTGGCTGCTACGGCTTTTGGCTCCCAACTGGCCGGCGCGGCAGTGTCGGCTGCGGTCATGATTGGTGGCACTTTGCTGCTGAACATGTTCTTCCCGCCGCAAATGCCGTCAGCCATGTCCTTGAATCGAGAGAAGGCGAGCCCAACGTACTCGATTTCCTCTCAAGGCAACCAGGCCCGGCTTATGGAAGCTATCCCGGTCCTGTACGGCCGCTTCCGCACTTTCCCTGACCTCGCTTCGGCTCCTTATACCGAGTCGCGGGGCAACGAGACTTACCTGTACCAGCTCTTCTGCATCACGCAAGGGCAAATGGACATCGAGACCATCCAGGTCGAGAACGACAATGTGTCCACGTACGGGGAAATCGAGTACCAGATTGTCAATCCTGGGCAGTCTGTTACCCTGTTCCCGGACAACGTCATTTCCAGCCCAGCCGTCAACAACTTTGAGCTGACGCCGCCGGAGCAGCCTGGCAATATCAAGGGGCCTTTTGCGGTCTCGAATCCTGGTGTACAAGTCAACTACATCGGCATTGACCTGTATCTGCCGGGTGGTGCCTATTACATGAACGACAAGGGGCGGTTTGAAACCTCTCGCGTCAACGTGCAATTTGAGTACCAGGCCATCAATGACGCGGGCGTTCCGTCCGGCAACTGGATGCCCTTGTTTAGCAAGGAATATGCTTTTGCGACCAATACCCCGCAGAGCATCTCCGAGAAGATCGAGGTTCCGCTCGGCCGCTATCAAGTACGCGGCTACCGTACCACGGCTGGCCCCGCGGATAACCGTGAAATCAACGTGATCCAGTGGGCTGTCATGCGGGGCTATGCTCCGTCGGTCCGCCAGTATGGTGACGTGACTTTGCTGGCCATGATTATCAAGGCCACGAACAACATCAACCAGCAAACCGCTCGTCGTATCAACGTGATTGGCACGCGTAAGCTGCCGGTGTGGGACCCGGTCAACGGTTGGTCTGTCAACCCAGTTGCTACGACCAATCCGGCTTGGGCTGCTGCAGATATCCTGCGCAATACGACCTATGGCCGGCGCTTGCCAACTTCCCGCATTAACATTCAAGAGCTGTACCGCCTCTCGCAGGTCTATCAGACTCGCGGCGATGAGTTCAACGGCGTTTTTGATACCACTTCTCAGCTGTGGGACGCGTTGACGAAAGTCTTGCGGGCGGGTCGGACTGTTCCGATCAACTACGCGGGCCTCATTGACTTTGTGCGCAACGAGCCCAAGACGGTTCCAACCTACATGTTCCAGCCTCAGAACATGGTGGAGAACTCGTTCAGCACTGAATACGCCTTTGCGGAGCCGGGCTCTACTCCGAACTATGTTCAAGTTGAGTATATCAACCGCGAAACTTGGGTGTCTGAGACTGTCGACTGCGTGCTCCCGGGCGTCGCTCCCACGATTCCGGCAAAGGTGCAGCTCATGGGCGTCACCAGCCGTGCTCAAGCATGGCGCGAAGGCATGTCCTTGGCCGCCGCCAACCGCGATCAGCGCCGCCAAATCAGCTTCTCGACAGGCTTTGAAGGCTATTTGCCTCGCTTCGGCGACCTCGTCCAGATTTCTCACGACGTTCCTCAATGGGGATACTCTGGTGAAGTCTTGGGCTTGAATGCCGGACCGGACAGCGAAGAATATGGCTTGCAGGGTGAACTGACCACTACAGAAGAGCTGGTATTTGTTCCCGGACTGACCCACCAAATCGCGTTCAAGAAGCGCGACGGATCGCCGCATGGCCCCTTCAACGTTGTACCGCATCCCTCCGGTCTGTACAACAAGGCCATCGTCCAAGCCACTGTCGCCCAGCTGCAGCAAATCTACATTTCGGACGGTTTTCGGGAGGAGCTGACGCAGTATCAATTCGGCCCTACCGAACGCCGTGGGCTGCGCGCAATCGCGTTGTCGGCTACTCCGGACAGCGACGGAAAAGTGCTGCTGACGTTCACGAACTACGCAGAGAGTGTCCATGCTGCTGAAAACGGGGGCGTTACTCCGCCTCCTGGCCCAGACTCGAACCTCCCGGGTATCGTCACGGTGCCCATCATCGATTCGGTCAAGCTGGAGCTGACCCCGTATGCATGGCAGCAGTTGATCGTGGCTACGCCTGCTCGTGGTGCCCGCTTGTATGAGTATGAGATTAGCCAGGACGGCCTCAATTGGTCCAACCTCGGTACGGCTACGTCTCCTTCGATGCAAGTCAACCTCAGTGGCGGCACCTGGTTTGTCCGAGTGCGTGCTATCGGCAACCTGACTGGCCCTTGGACTACTTGGACTGGTGTCGTTGAGGCGTCTACGCTTCCAGCTTCTCGCGTCGATCACGTCTCCATTACGTCGGTTGTGTTTGGTATCGACCTCGAATGGGCTGTGCGTGAAGACGACTATCTGGCTGCGTCCGTTGAAGTGTACTGGGGAACTACCAACGTGCTTGGCAATGCCACCAGGCTCATTGACATGCCGCTGCCAGGGAATAAATTCTCTGTCACGGACCTCGGGCCTGGTGCTGTTCGGTACTTCTGGTTCCGAGCGATTGACGAAGCAGGGCGCGTCGGTCCTTGGTACAACAACGGCGTGGGTCTGATGGGCAAGTCCAGCGATCAAGCTGACATTATCATGGCCTATCTGGACGGCAAGATCACTGAGACCCAACTGGCTCAATCCCTTATCGAGAAGATCGATTCTGGTGGCGGAGCTGCAGTCGAGGTGGAGGCAATCCAAAACGCCTTGGCCGCAATGTATACCATCAAAACGCAGTTGACGGCTGGTGGCCGCACAGCTCTTGCTGGTATCGGTGTTGGTGTCGAAAACAACGACGGTGTGCTAGAATCACAAGTACTTGTGTTGGCAGACCGATTTGCGGTGGGTCGTTCTGATGATGCTACTGGAACTTTCAAGTCCATGTTCATCATCGACAACGGCAACGTGTACATCGACACTGCCTTCATCAAGAATGGTACTATCACAAACCTCATGATCGGGGACATTATCCAGTCCAACGATTATGTTGCGGGGGTATCCGGCTGGCGTCTCCATAAGGGAGCCCAAGGGTTTGAAATGAACGGCACCGGCAACGGTTACCGAGTTCGTCTCACCAACACGGGCTTGTACGTATGGAACACCAACACCGGTGTCCTCTGCGTTGAAGTGGGGCTGCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b496927da48e5a65870c12164ea1def8074fddb9817e93eb0375f44a55945ad8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Compounding Achromophages for therapeutic applications Cobian-Guemes,A.G., Le,T., Rojas,M.I., Villela,H., McNair,K., Hung,S.-H., Han,L., Boling,L., Octavio,J.C., Dominguez,L., Cantu,V.A., Archdeacon,S., Vega,A.A., Jacobson,N., An,M., Hajama,H., Burkeen,G., Edwards,R.A., Conrad,D., Rohwer,F. and Segall,A.M. 2006 — GenBank