Protein

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Genbank accession
WHM53131.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MFKFCDGFDHYVPVGTKGTAIQSYLQAAGYTVRNASDTTFSMVEGRRSGAMALKFTVAQSSSINASLSWGFTTTSDLVVFGFAMKAGLSRMRVARIENIVDIEWDVATGKLRVGEELGVNPLILNAWYYFEIEVNKTANTVKIFANNELQLTVQPSSPPTTQYTIVWGQTGTAPNAGEQTLDDFYVIDGTGSRNNERLTPVEVTSRMPTADVKTEWEVANGSSGTPHYQIAAQLSPGGESKPYLQSNQAGAQDMFRSNVTLPNNNQIFAVSVIAYARKGDLDDRKLGLTINTAGGTPSETQVALTETYKYYQASYETAPGGAEWNQNNVESLEFGITTR
Physico‐chemical
properties
protein length:339 AA
molecular weight: 36966,71480 Da
isoelectric point:4,96917
aromaticity:0,10029
hydropathy:-0,31416

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XAP3
[NCBI] 		3043621 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas citri
[NCBI] 		346 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHM53131.1 [NCBI]
Genbank nucleotide accession
OQ756160 [NCBI]
CDS location
range 36014 -> 37033
strand +
CDS
ATGTTTAAATTTTGCGATGGCTTCGACCATTACGTTCCGGTAGGGACAAAAGGTACCGCCATTCAATCCTATTTGCAGGCCGCCGGGTACACCGTGCGTAACGCATCCGACACGACTTTCTCCATGGTCGAGGGTCGCCGTTCCGGTGCCATGGCACTTAAATTCACCGTGGCGCAAAGCTCGTCCATCAACGCCTCGCTGTCATGGGGTTTCACCACCACGTCCGACCTGGTCGTGTTCGGGTTCGCCATGAAAGCCGGCCTTTCCCGTATGCGTGTTGCGCGTATCGAGAACATCGTCGATATCGAATGGGACGTTGCTACCGGTAAACTGCGCGTCGGCGAAGAGCTGGGGGTAAACCCTCTGATCCTGAATGCGTGGTACTACTTCGAGATCGAGGTGAACAAGACCGCCAACACCGTTAAGATTTTCGCGAATAACGAATTGCAGCTGACCGTCCAGCCGTCATCCCCGCCGACCACGCAGTACACGATTGTCTGGGGGCAGACCGGTACCGCACCGAACGCGGGCGAACAGACTCTCGACGACTTCTACGTTATCGACGGTACCGGCAGCCGTAACAACGAGCGCCTGACTCCGGTCGAGGTGACCAGTCGCATGCCAACGGCAGACGTGAAGACCGAGTGGGAAGTGGCTAATGGTTCGAGCGGCACGCCGCACTACCAGATCGCCGCGCAGCTGTCACCGGGCGGAGAGAGCAAACCGTACCTGCAATCCAACCAAGCCGGAGCACAGGACATGTTCCGCTCAAACGTTACGCTGCCGAACAATAACCAGATCTTCGCCGTATCGGTCATTGCGTATGCCCGTAAAGGTGACCTTGATGATCGTAAACTCGGCCTGACCATTAACACCGCTGGCGGCACACCATCGGAGACGCAGGTCGCGCTGACTGAGACGTACAAGTATTACCAAGCGTCCTATGAAACAGCGCCGGGCGGGGCTGAGTGGAACCAGAACAACGTCGAGTCATTAGAGTTCGGCATCACAACACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6d050dbfdfa0857190d730af56c6b7e3dfb90126edc37e31095990201b6803d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8757
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation characterization and In-vivo application of bacteriophages for the biocontrol of Citrus Canker Rehman,M.U., Khan,M.I., Hayat,A., Khan,I., Rizwan,M., Rehman,S., Ullah,Z. and Alvi,I.A. 2021-09-01 — GenBank