Protein

View in Explore
Genbank accession
XRX11820.1 [GenBank]
Protein name
lytic tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEFPKSFDDPAYDAADTSAAAAAGIDPILLRSIRTSGEQSNADQVSSKGATTPYQFIPATRKAILDKYGIDVTLNPQNASLGAAYLLKEGMERNGGDASAAVAEYHGGLDRAQHGPINRAYVSRVMQGAQDAYLDQVAQDVAQASIAPQEQPAAAAEPQSGPEGAADPLDELAASIAAEPTLGQKAADLVTGDLRRTPETEAAPDWTQLPEYANNFGSAGWKAAIGTTFSNPEETAQVMKANFPGIEVRQDDKGNYFLKSAEDGKEYAIKPGFRATDIPRAIGSVAAFTPVGRVASIPGQAAAAAGIQGAIEGTQAATGGSFSPTDVVAAGALGALVPAASRGVSALANKLGGGADEVAAAARGAPEPVPQPEVVPPASPSAARAAQYEADAAKAGAVPEAATLPTAAPLAQADLSAVAKQAATGTGRAQTRAQQILAEQAAPDAETIAAARRLGIEDNLQPDHVTTNQSFRELSQAVKSMPGSEARAQEIEGLQQVAKRADDLVTELGGTKDLSTLSDNVKNRMLATVDDLEGQANKLYGDIRKAIPSDTRVTAPTTLEFIQERAKSLGGVENLTPMEKRIVAKLSPKTRTTAEQVPVRVGVTSGTTRQVGSTELPRYGLMDDIRTSVGQAARMQGPFKDADTGLAKKLYGLITADQEAAIQPFGMTETIDAAKAAVRTRKALEDDVVSLFGKNLGSSIVGNLAGGVQGLGKGDTSKFLKLLNAVPQPMRQEVTASALNYGFRNGAKAGDLNFRTFAQWFEGLQQNKQAYNALMANLPKEAPQMLKDLYRVSSGISAASKERIMTGRLNAITKELQGPDTAIQKIYAAAGKVAGVAAMEAATSTVGAPGAGLAAGITSALMKGKPDVMKAADKLISDPAFISMAKASMRGEAPKASTVKHLAKSAQMREFFKKAGKPPEMREHEKWLMSLFQSSNESQN
Physico‐chemical
properties
protein length:941 AA
molecular weight: 98047,15660 Da
isoelectric point:5,72183
aromaticity:0,04888
hydropathy:-0,29713

Domains

Domains [InterPro]
G3DSA:1.10.530.10
RBD
10–146
G3DSA:1.10.530.10
IPR023346
STR
12–129
IPR023346
DC_0776
STR
36–941
DC_0776
cd00254
ENZ
42–131
cd00254
XRX11820.1
1 941
Architecture
STR
STR 10-941
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PfAn1
[NCBI] 		3411810 Viruses > unclassified bacterial viruses >
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX11820.1 [NCBI]
Genbank nucleotide accession
PV364321.1 [NCBI]
CDS location
range 14608 -> 17433
strand +
CDS
ATGGCAGAGTTTCCGAAGTCCTTCGATGATCCTGCTTACGATGCGGCCGACACGTCTGCGGCAGCCGCCGCCGGCATTGACCCCATCTTGCTGCGTTCGATCCGCACAAGTGGCGAGCAAAGCAACGCCGATCAGGTAAGCAGCAAGGGCGCAACGACCCCGTACCAGTTCATCCCGGCCACCCGCAAGGCGATCCTGGATAAGTATGGGATCGATGTAACTCTGAACCCGCAGAATGCTTCCCTGGGAGCCGCGTACCTTCTCAAGGAAGGAATGGAGCGCAATGGTGGCGATGCATCTGCGGCCGTTGCTGAGTACCACGGTGGCCTTGACCGGGCGCAACATGGCCCGATCAACCGCGCCTATGTCAGCAGGGTCATGCAGGGCGCCCAGGATGCGTATCTTGATCAGGTGGCACAAGATGTCGCCCAAGCATCAATCGCCCCCCAGGAGCAGCCAGCGGCAGCCGCAGAGCCGCAATCCGGCCCGGAAGGCGCAGCGGATCCCCTTGACGAGCTGGCCGCATCAATTGCCGCCGAACCAACACTTGGACAGAAGGCTGCCGATCTGGTAACCGGTGACCTTCGCCGAACCCCAGAAACCGAGGCTGCCCCGGACTGGACCCAGCTCCCCGAGTACGCAAACAACTTCGGGTCGGCCGGGTGGAAAGCGGCCATCGGTACGACATTCTCCAACCCCGAAGAAACCGCCCAGGTGATGAAAGCCAACTTCCCCGGCATCGAGGTACGCCAAGACGACAAGGGGAATTACTTTCTCAAGTCGGCAGAGGACGGAAAGGAGTACGCGATTAAGCCGGGATTTCGAGCCACTGACATCCCGCGCGCAATCGGCAGCGTTGCGGCCTTCACCCCGGTCGGACGCGTAGCTTCCATTCCTGGCCAGGCAGCCGCAGCCGCCGGCATCCAGGGCGCAATCGAAGGCACTCAAGCAGCCACTGGCGGATCATTCAGTCCGACCGATGTGGTGGCGGCTGGTGCGCTTGGCGCTCTGGTTCCTGCAGCATCGCGCGGAGTTTCGGCGCTAGCCAATAAGTTGGGCGGCGGTGCCGATGAAGTGGCTGCAGCAGCCCGAGGCGCCCCCGAGCCGGTTCCGCAGCCAGAAGTTGTGCCGCCGGCAAGTCCATCTGCCGCCCGCGCGGCTCAGTATGAGGCGGATGCAGCCAAAGCCGGCGCAGTTCCAGAGGCCGCCACTCTTCCAACCGCCGCCCCCCTGGCCCAGGCCGATCTATCCGCAGTAGCCAAGCAGGCCGCCACCGGCACAGGTCGCGCGCAGACCAGGGCTCAACAGATCCTTGCCGAGCAGGCTGCCCCAGACGCCGAAACAATTGCAGCCGCTCGCCGGCTGGGCATCGAGGACAACCTACAGCCCGATCACGTCACCACCAACCAATCGTTCCGCGAGCTTTCTCAAGCGGTCAAGTCGATGCCTGGCAGTGAGGCCAGGGCCCAAGAGATCGAAGGCTTGCAGCAGGTAGCCAAGCGAGCCGACGACCTGGTAACCGAGCTGGGGGGAACCAAGGATCTATCCACGCTTTCCGACAACGTGAAAAATCGTATGCTGGCAACGGTCGACGACCTGGAGGGGCAGGCAAACAAGCTGTATGGCGACATTCGAAAGGCTATCCCGAGCGATACCCGGGTAACCGCGCCGACAACCCTGGAGTTCATCCAGGAGCGGGCCAAGTCTCTTGGTGGAGTTGAAAACCTAACGCCGATGGAAAAGCGGATTGTGGCCAAGCTTTCGCCCAAAACGCGGACGACCGCAGAGCAGGTGCCCGTCCGCGTCGGCGTCACCAGCGGTACCACCCGCCAAGTGGGATCCACCGAGCTTCCGCGCTACGGCCTGATGGATGACATCCGCACCAGTGTCGGGCAAGCTGCGCGCATGCAAGGGCCGTTCAAGGATGCCGACACCGGGCTGGCCAAAAAACTCTATGGGCTCATCACCGCCGACCAGGAAGCGGCGATTCAGCCTTTCGGCATGACGGAGACCATTGATGCAGCAAAAGCAGCCGTGCGCACACGCAAAGCCCTCGAAGATGATGTGGTTTCGCTTTTCGGTAAAAACCTTGGCTCTAGCATCGTTGGCAATCTTGCTGGCGGTGTGCAAGGTCTTGGTAAAGGCGACACTTCTAAATTCCTGAAATTGCTCAACGCCGTCCCGCAGCCGATGCGCCAAGAGGTGACCGCCTCGGCCCTGAACTATGGCTTCCGCAACGGGGCAAAGGCCGGCGATCTGAACTTCCGCACCTTCGCTCAATGGTTTGAAGGCCTGCAGCAGAACAAGCAGGCTTATAACGCCCTGATGGCCAACCTGCCAAAAGAAGCCCCGCAGATGCTGAAAGACCTTTACCGGGTATCCAGCGGGATTTCGGCTGCCAGCAAAGAGCGGATCATGACCGGGCGCCTCAATGCGATCACCAAGGAGCTGCAAGGGCCGGACACGGCCATACAGAAGATTTACGCCGCCGCCGGAAAGGTTGCCGGCGTTGCGGCAATGGAGGCCGCCACCAGCACGGTGGGCGCTCCTGGAGCCGGCCTGGCGGCGGGAATCACCTCGGCCCTGATGAAGGGGAAGCCGGACGTGATGAAGGCCGCCGACAAACTGATATCTGATCCTGCGTTTATCTCCATGGCGAAAGCCTCGATGCGCGGCGAAGCGCCGAAGGCATCAACCGTAAAACATCTGGCAAAATCCGCGCAGATGAGGGAGTTCTTCAAAAAGGCAGGGAAGCCACCAGAAATGCGCGAGCATGAAAAATGGCTGATGAGCCTCTTCCAGTCCTCCAACGAAAGCCAGAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ae328ff2ebfff08a5b065a728c9539c494050559d08ad0e1592860e19aaea9bb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7078
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of the novel bacteriophage PfAn1 from Lake Baikal infecting Pseudomonas fluorescens Gorshkova,A., Belykh,O., Tikhonova,I., Xi,L., Siniagina,M., Drucker,V. and Potapov,S. — — GenBank