Protein

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Genbank accession
AND75520.1 [GenBank]
Protein name
tail collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MARKVFTDGEILYAEDVNTIGKPFVDGQDILGHGDKVDDNSLSDDPEHLKSRFYAWYNRFKVSVSSGLTLSVTQGVISVSGNIISFPPQTINAINNSTSYIWIGKTEVYPTIALRVSVSLPDVCIPLARIISASGVVTSITDLRDVAVDILPPSIPDAVPVGTSIISLLPPTSPVPTGYIELLENPQNISRTTYSALFAEYGTYYGAGDGSTTFTIPGTGQRFLRLGGGSLNPGSVGGDSQITIPNDSIPPHAHNIPSTTHTHGVTDAGHTHNVTQTPHTHGVTDTGHAHFIGGILPYLGNQTFSWDLNSAQTNNDYRNGLTTDINSTGISINSSNANISVNSSGSGVSVQQASTGISSTNNAGNGQAFTHIQPFLVFRVFVKY
Physico‐chemical
properties
protein length:384 AA
molecular weight: 40700,63060 Da
isoelectric point:5,50840
aromaticity:0,07812
hydropathy:-0,11224

Domains

Domains [InterPro]
DC_0891
STR
5–384
DC_0891
IPR037053
ATT
152–219
IPR037053
SSF88874
STR
171–278
SSF88874
IPR011083
ATT
175–223
IPR011083
AND75520.1
1 384
Architecture
STR
ATT
STR
STR 5-151 | ATT 152-223 | STR 224-384
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Nostoc phage N1
[NCBI] 		1775255 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Nostoc sp.
[NCBI] 		1180 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AND75520.1 [NCBI]
Genbank nucleotide accession
KU234532 [NCBI]
CDS location
range 26558 -> 27712
strand +
CDS
ATGGCTAGAAAAGTTTTTACAGATGGTGAAATTCTATACGCAGAAGATGTTAATACCATCGGCAAACCATTTGTTGATGGTCAAGATATACTAGGACACGGCGATAAAGTTGATGACAACAGTTTATCAGATGATCCAGAACACCTTAAAAGTCGTTTTTACGCATGGTACAATCGTTTTAAAGTTTCTGTTTCATCAGGTTTAACTCTTTCAGTTACTCAGGGTGTCATATCGGTTTCTGGTAACATCATCAGTTTTCCACCACAAACAATCAACGCGATCAATAATTCCACTAGTTATATATGGATAGGTAAAACAGAAGTATATCCTACCATAGCTTTGAGAGTCAGTGTGTCACTTCCAGATGTTTGCATACCATTAGCAAGAATAATCAGCGCTAGTGGTGTTGTGACATCTATTACAGATTTGCGCGATGTTGCAGTAGACATTTTACCCCCTTCCATTCCTGATGCTGTACCTGTTGGTACTAGTATCATTTCTCTTTTACCACCTACTTCACCAGTCCCGACAGGTTATATAGAGTTGCTGGAAAACCCGCAAAACATTTCCAGAACAACTTACAGCGCTTTGTTTGCAGAATATGGTACTTACTATGGTGCTGGTGATGGTTCTACAACTTTCACCATTCCTGGTACTGGACAACGATTTTTAAGGTTAGGTGGCGGATCTTTAAATCCGGGATCTGTAGGTGGTGATTCTCAAATAACAATACCTAATGATTCTATTCCCCCTCATGCTCATAATATACCTTCTACAACACACACACATGGTGTTACAGATGCTGGTCATACCCACAATGTAACTCAGACACCTCATACTCATGGTGTTACAGATACGGGTCATGCTCATTTTATCGGAGGTATATTACCTTATTTAGGCAATCAAACATTTTCTTGGGATTTGAACAGCGCTCAAACAAACAATGATTATAGAAACGGTTTGACAACAGATATTAATAGTACGGGTATAAGCATTAACTCATCAAACGCCAATATAAGTGTAAACAGTTCTGGATCTGGTGTTAGTGTACAACAAGCTTCTACGGGGATCTCTTCAACAAATAACGCCGGAAATGGTCAAGCTTTTACTCATATACAACCATTTCTAGTGTTTAGAGTTTTTGTAAAATACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
887482da80bf34e2ba8c1fdd2c3fa5e241d9183bff43cfa4d5c1e3a277c93f9a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7109
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50