Protein

View in Explore
Genbank accession
WPK32976.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSWQEQIKPAGTQDIQCDIEYLDKSYIHVYLDGVETTGYTWTSSTNIRLNTALTADTTVLLIRKTEREYLYIEFASGSPFIEVNVDSQNTQFLHLAQEMVEGRAIPGFYGDISMNGYRITNLGDGVNPGDAVNKGQLDAVDARVTALEQGINTDDVTIPWCTVTTVPTNTISPPYRFTRATLYLDGVHQDIGYGFSIANNQIILAETIPAGTVVSVRIGQDSTDLDAVSRSEFDDLKEYVYNMDLGEL
Physico‐chemical
properties
protein length:250 AA
molecular weight: 27721,48510 Da
isoelectric point:4,24067
aromaticity:0,09600
hydropathy:-0,21360

Domains

Domains [InterPro]
DC_1609
STR
1–220
DC_1609
IPR005604
ATT
13–103
IPR005604 IPR008635
G3DSA:6.10.250.2040
STR
121–174
G3DSA:6.10.250.2040
WPK32976.1
1 250
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-103 | STR 104-220 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV102
[NCBI] 		3077248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK32976.1 [NCBI]
Genbank nucleotide accession
OR352933.1 [NCBI]
CDS location
range 7466 -> 8218
strand -
CDS
ATGGCGTACAGCTGGCAAGAGCAAATCAAGCCAGCTGGTACCCAGGATATCCAGTGTGATATTGAGTATTTGGACAAGTCCTATATTCATGTATATCTCGACGGCGTTGAAACCACTGGGTACACCTGGACCAGCTCTACAAATATTAGGCTGAACACAGCCTTAACAGCGGATACGACGGTACTGCTCATTCGCAAGACTGAGCGCGAGTATCTGTACATTGAGTTTGCTAGTGGTTCCCCATTCATCGAGGTGAACGTAGACTCTCAAAACACACAGTTCTTACACTTAGCTCAAGAGATGGTGGAGGGTAGGGCCATCCCCGGATTCTACGGGGATATAAGCATGAACGGCTACCGGATTACCAATCTTGGGGATGGTGTTAATCCTGGCGACGCTGTAAACAAGGGACAACTGGATGCGGTAGATGCCCGTGTAACCGCGCTTGAGCAGGGTATAAACACGGATGATGTGACTATCCCGTGGTGTACTGTTACCACGGTCCCGACTAATACCATCAGCCCGCCGTACCGATTTACTCGCGCCACCTTGTATCTTGATGGGGTGCACCAGGATATCGGTTACGGGTTCAGTATTGCGAACAACCAGATTATCCTGGCTGAGACAATTCCGGCTGGTACAGTAGTATCTGTGCGTATCGGACAGGATTCGACGGACTTGGATGCAGTGTCACGGTCTGAGTTCGACGACTTAAAAGAGTATGTATATAACATGGACTTAGGAGAACTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
11620103e37c7d909b2c81d0a84f0a9b30e3a4ebd146222a544bdb884ce89c01
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8476
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank