Protein

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Genbank accession
QPZ53722.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,62
TF
Evidence RBPdetect2
Probability 0,67
Protein sequence
MTKTRNLSDLLDANGDVKLGNLDNVPASNDASALTTGTLPIARIADGDIALAKLSATGTKDATTFLRGDNTFASAGGITEADQFRLSANLNLTSEVVLTGWERPDNQSNSLNCFSKIGTGMTESSGIFSFPSTGIYLINFNINCIPVGAANGSNAKIEGTKNNSSYTLLAQAGFYAGAGENTTVSTSVIFDVTNTTNDKIQFKGQKLYGGGTHVTYSGNTAINLTEVTFTRLGDT
Physico‐chemical
properties
protein length:235 AA
molecular weight: 24546,84990 Da
isoelectric point:4,83384
aromaticity:0,07234
hydropathy:-0,16936

Domains

Domains [InterPro]
IPR008983
RBD
75–221
IPR008983
IPR008983
RBD
84–221
IPR008983
QPZ53722.1
1 235
Architecture
RBD
RBD 75-221 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC204P
[NCBI] 		2796524 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53722.1 [NCBI]
Genbank nucleotide accession
MW273926 [NCBI]
CDS location
range 12115 -> 12822
strand -
CDS
ATGACAAAGACAAGAAATTTATCAGACTTACTAGATGCTAATGGTGATGTTAAATTAGGTAATTTAGATAACGTACCAGCTAGTAATGATGCTAGTGCATTAACTACAGGTACACTACCTATAGCTAGAATAGCTGATGGAGATATTGCTCTTGCTAAACTTTCTGCAACAGGAACTAAAGATGCTACAACTTTTTTAAGAGGGGATAATACTTTTGCTTCTGCTGGTGGAATTACAGAAGCTGACCAATTTAGATTAAGTGCTAATTTAAATTTAACTTCTGAAGTAGTTTTAACTGGTTGGGAAAGACCAGATAATCAAAGTAATAGTTTAAATTGTTTTTCAAAAATAGGAACTGGAATGACAGAAAGTTCTGGTATTTTTTCTTTTCCATCAACTGGAATTTATTTAATAAATTTTAACATTAATTGTATTCCAGTAGGTGCTGCTAATGGTTCTAACGCAAAAATTGAAGGAACAAAAAATAATTCTAGTTATACTTTACTTGCACAAGCTGGTTTTTATGCAGGTGCTGGAGAAAATACAACAGTTTCTACTAGTGTTATATTTGATGTTACTAATACAACTAATGATAAAATACAATTTAAAGGTCAAAAACTTTATGGTGGTGGTACTCATGTAACATATTCTGGAAATACAGCTATAAACTTAACTGAAGTAACATTTACAAGATTAGGAGATACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0348b7461aa6139bbb9a8cf30f262d68aebf85c908903f2e727b9371ea1a4b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank