Protein

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Genbank accession
AAP83497.1 [GenBank]
Protein name
putative protein 28
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MTKDNTWREVTLTLPPRMAYTHVFEDTKPNHYDINNLSVATLYAGVRVLPSPHEYELMVPSNGRNILARKEGSSQIEIYNDSDVTARIILTTFNEPFNPAVLANSASSTSGGGGGGATDGNVIVKGFSSALPAGNNNLGKVVVTEMPTVPIEFKTLPSGTNMIGNVGVTKLPPLAEGTSHIGSVNVEGGVSIASMPPVQVTNDPVRASCIAWEGTISVNHVVFDMGQHDVLKFNYILNEGDTDLFINFDSYQATPNDLKGAGLTGRAATIRMRPGESITDFTRKTSKVNMIRTSGSGTVRILGV
Physico‐chemical
properties
protein length:304 AA
molecular weight: 32438,25800 Da
isoelectric point:5,87638
aromaticity:0,06250
hydropathy:-0,14572

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAP83497.1
1 304
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,6503
Central domain 202 293 93 0,0047
C-terminal 294 304 10 0,9940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-293
C-terminal
294-304

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Bam35c
[NCBI] 		236750 Preplasmiviricota > Prepoliviricotina > Tectiliviricetes > Tectiviridae > Betatectivirus
Host Bacillus thuringiensis
[NCBI] 		1428 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAP83497.1 [NCBI]
Genbank nucleotide accession
AY257527 [NCBI]
CDS location
range 12208 -> 13122
strand +
CDS
ATGACGAAGGATAATACATGGCGTGAGGTCACACTCACATTACCGCCTAGAATGGCGTATACACACGTATTTGAAGATACAAAACCAAATCACTATGACATTAACAATCTATCTGTAGCGACGCTATACGCGGGCGTACGTGTCCTACCAAGTCCACACGAATATGAACTAATGGTTCCAAGTAACGGGCGTAACATCCTAGCAAGAAAAGAAGGGTCTTCCCAAATTGAAATTTACAATGATAGTGACGTCACGGCGCGTATCATTTTAACAACATTCAACGAACCATTTAACCCGGCTGTACTTGCTAATAGTGCAAGTAGTACAAGTGGCGGGGGTGGCGGTGGTGCTACAGATGGAAACGTCATTGTAAAAGGATTCTCAAGCGCGCTTCCTGCCGGAAATAACAATCTAGGAAAAGTAGTTGTGACGGAAATGCCTACCGTTCCAATTGAGTTTAAAACATTACCATCGGGTACAAATATGATTGGTAACGTAGGTGTCACGAAACTACCACCACTTGCTGAAGGTACAAGTCATATCGGAAGTGTAAACGTAGAAGGCGGGGTTTCTATTGCGAGTATGCCACCTGTACAGGTTACGAATGACCCTGTTCGAGCTTCTTGTATTGCGTGGGAAGGAACAATTAGTGTAAATCATGTTGTGTTCGATATGGGACAGCATGACGTACTTAAATTCAATTATATTTTGAATGAAGGGGATACAGATTTATTTATAAACTTTGATTCATATCAAGCGACTCCTAACGATCTAAAAGGAGCCGGATTAACGGGTAGAGCTGCTACTATCAGAATGCGACCAGGTGAATCTATTACAGACTTTACAAGAAAAACAAGCAAGGTCAATATGATTCGTACAAGCGGTTCTGGAACTGTCCGTATTTTGGGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a6bf530c5f5f37698b4685beede2de9ad706c7640a42d79dc6bc8c0bb1420a21
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6837
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of bacterial viruses Bam35, infecting a gram-positive host, and PRD1, infecting gram-negative hosts, demonstrates a viral lineage Ravantti,J.J., Gaidelyte,A., Bamford,D.H. and Bamford,J.K. 2003 12954208 GenBank