Protein

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Genbank accession
YP_009609576.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSNIMAGFGEGFVETQIMSENNAVRYKLSVAAGLKSSAPSNEYILLQDKPLGEQGNSPGMNVREINLSTNTVISRKIFDFKNGELVGANKSFVDYMTSLVAKDNTIIVLSTGDRLYSSETVDNWFKSVASPSWPGTWMCSKYPCSYVAFYSVHKKKIIQEHTTYSDGVLRDEDVRAQLEVVYDKFDDIGATGFVKRAIEEADEASSATEYEFKRYPSGAPIIASMKDYSITPGSKLKASFELFADKALLDSGQSTRLNFRWFKGSTILTSQANEVPIGQSDRWIKYERYIDVPATADGFTVIAARYPRQDTSVGLGAVRNLILLEVSRQDEAISRSAEFGVNGIRMNKAIDGQNSELLILPDTKDDPSGEIRSAEFREYAKTV
Physico‐chemical
properties
protein length:383 AA
molecular weight: 42490,26820 Da
isoelectric point:5,22569
aromaticity:0,09922
hydropathy:-0,33943

Domains

Domains [InterPro]
DC_0912
STR
1–383
DC_0912
PS52031
LEC
22–197
PS52031
YP_009609576.1
1 383
Architecture
STR
STR 1-383
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009609576.1
1 383
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,3550
Central domain 175 372 199 0,3057
C-terminal 373 383 10 0,3997
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-372
C-terminal
373-383

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage CHI14
[NCBI] 		2006941 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Winklervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009609576.1 [NCBI]
Genbank nucleotide accession
NC_041996 [NCBI]
CDS location
range 156040 -> 157191
strand +
CDS
ATGTCTAATATTATGGCAGGTTTTGGCGAAGGATTTGTCGAAACTCAAATTATGTCAGAAAATAATGCCGTAAGATATAAACTCTCAGTAGCTGCCGGGCTGAAAAGCTCGGCTCCTTCAAATGAATATATTTTACTGCAGGATAAGCCATTAGGAGAACAAGGAAATTCTCCTGGGATGAATGTTCGCGAAATAAATCTTTCTACTAATACAGTTATCTCCCGCAAAATATTTGATTTCAAAAATGGTGAACTTGTAGGAGCTAATAAAAGCTTTGTCGATTATATGACTTCACTTGTGGCTAAAGATAATACAATTATTGTACTAAGCACTGGGGATAGACTTTATTCTAGCGAAACTGTTGATAATTGGTTCAAATCTGTTGCATCTCCTAGTTGGCCAGGCACATGGATGTGCTCTAAATATCCATGTTCTTATGTTGCGTTTTATTCAGTTCATAAGAAAAAAATCATACAAGAACACACAACTTATTCTGACGGGGTCCTTCGTGATGAAGATGTAAGAGCTCAATTAGAAGTAGTGTATGACAAGTTTGATGATATTGGAGCCACTGGATTTGTTAAAAGAGCCATAGAAGAAGCTGATGAAGCTTCTAGTGCTACCGAGTATGAATTTAAACGATATCCTTCTGGAGCGCCTATCATTGCTTCAATGAAAGACTATTCTATTACTCCTGGTTCAAAGCTTAAGGCTTCTTTTGAGCTATTTGCGGATAAAGCGCTTCTAGATTCAGGACAATCCACTAGATTAAATTTTAGATGGTTTAAAGGAAGTACGATTCTGACGTCTCAGGCTAACGAGGTGCCCATCGGACAATCAGATAGATGGATAAAGTACGAACGATATATAGACGTTCCTGCTACTGCTGACGGCTTCACGGTAATTGCTGCTCGATATCCTCGTCAAGATACTAGTGTAGGACTAGGCGCTGTAAGAAATCTAATCCTTCTTGAAGTTTCTAGACAAGATGAAGCAATTAGTAGATCAGCTGAATTTGGTGTAAATGGTATAAGAATGAATAAAGCTATAGATGGACAGAATAGTGAACTTCTTATTCTTCCAGACACTAAAGATGATCCATCCGGTGAAATTAGATCTGCTGAATTTAGAGAATACGCGAAAACTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5279199ff180d986e6c9472755258db9c8ea4fcaabbc70b2587425695bf4c4ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6471
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental T4-family bacteriophages evolve to escape abortive infection via multiple routes in a bacterial host employing altruistic suicide through Type III toxin-antitoxin systems Chen,B., Salmond,G.P.C., Akusobi,C. and Fang,X. — — GenBank