Protein

View in Explore
Genbank accession
AXH71804.1 [GenBank]
Protein name
tail-associated lysin
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MIVLKLADGSTLHDVRDNNRQVVGYISDAKNAVGTLDFDIYPKHPAYNAIKAGSTKIRAYRDGMWTHDYTVESVTNDLQLKKHVTATDELQYLERIEVPSYKTGVDGVPQTVSGFSMWLIEYYNARSGGERFAFGQIEGDIIDPTTTLDRSSDSPATVASIVKDKIIDSMGGYVRVRRVDGVLTIDLKADAAGVCKQYIEFGENLVDYADEQDAGELCTAVTAESTYKNDAGDEVTITLADAPNGKYLTGYAKQGDTVTNTVAAAAYGVRRKHLTFDGIKDVYTLVENCEKYIAAHCEPVTTVNVSAADLSTLDSNVQSFDVGLYTRVKAAPMGFDAAFECQGAKRSLNDPTDDKYTLGWTWNSLSSINNRKSVETALGIGKLEQATTEIDQAAKDAAQQAQTAQDVASAANINATDAVTKADSAKEEATSASDTAQRAEAISAEAKQTATQANGVAQDASETASTAAITAAQAGATATEAKSTATQTASDLSNYATNTNLMLEDMQGQIDGSITTWFFAVPPTNENAPANEWTTTDLKNKHLGDLYYDTNTGYSYRWQVLQSVYSWQRITDVDVTKALADASKAQDTADAKRRVFYSQPVPPYDKGDLWSQGTNGEMLICATPKTDGMSFLASDWGKATKYTDDTKAIEAERLAEEAAKTATDFIDFGADGLIVGDMTDGALAGNVRIASDGIELRDGTSVLARLKAELLELAANSVNAIIKLCGGLGTIRQSTERFADGDHSSLTIESTESVAVKGANAQITATGSVFAGNVKSTPSDPAQYCGLQVTPNGSAIVSGYAATVGSATKVYLSSDKNLPVQINGSDMVDFVVAQGTSGGWRWRKWASGLAECVGSFSVSISTPTAWGAVFYGNVPRQSYPFTFISTPEEFITLQGGYFWIIADNNSKTQTNIAYCVSAREVASINVWIEYKVEGRWK
Physico‐chemical
properties
protein length:937 AA
molecular weight: 100550,15720 Da
isoelectric point:4,67583
aromaticity:0,08324
hydropathy:-0,29701

Domains

Domains [InterPro]
DC_1139
ATT
3–196
DC_1139 DC_0308
Coil
Unmapped
383–403
Coil Coil
AXH71804.1
1 937
Architecture
ATT
STR
ATT 3-196 | STR 335-928 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Eggerthella phage PMBT5
[NCBI] 		2283015 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Eggerthella lenta
[NCBI] 		84112 cellular organisms > Bacteria > Bacillati > Actinomycetota > Coriobacteriia > Eggerthellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71804.1 [NCBI]
Genbank nucleotide accession
MH626557 [NCBI]
CDS location
range 19426 -> 22239
strand +
CDS
ATGATAGTACTAAAGCTTGCAGACGGTAGTACTCTACACGACGTGCGCGATAATAACCGGCAAGTAGTCGGGTATATTTCCGACGCTAAAAACGCCGTTGGTACGCTAGATTTCGACATATACCCGAAACATCCTGCTTATAACGCCATTAAGGCTGGAAGCACGAAGATACGAGCATATCGTGACGGCATGTGGACGCATGATTACACTGTCGAGAGCGTAACCAACGACCTCCAGCTTAAAAAGCACGTTACCGCAACGGACGAATTGCAGTACCTAGAGCGCATCGAAGTACCCTCATACAAGACAGGCGTTGACGGCGTGCCACAGACCGTTAGCGGGTTCTCCATGTGGCTAATCGAGTATTACAACGCTCGAAGCGGTGGAGAGCGTTTCGCGTTTGGCCAGATCGAGGGCGATATCATTGATCCTACAACGACGCTGGATCGAAGCAGCGATAGCCCGGCAACGGTTGCTAGTATCGTTAAAGACAAGATCATAGATTCAATGGGCGGTTACGTGCGCGTTCGGCGCGTTGATGGAGTGCTTACGATCGACCTAAAGGCCGATGCTGCCGGTGTTTGCAAGCAGTATATCGAATTTGGCGAAAACCTGGTTGATTATGCAGACGAGCAGGACGCTGGCGAACTTTGCACTGCCGTAACTGCTGAAAGCACGTACAAGAACGATGCCGGCGACGAAGTCACGATTACGCTTGCTGATGCGCCTAATGGCAAGTATCTCACTGGATACGCAAAGCAAGGCGACACGGTAACTAATACAGTAGCAGCAGCAGCATACGGAGTTCGTCGCAAGCACCTAACGTTTGACGGCATTAAGGACGTATATACTCTTGTCGAAAATTGCGAAAAGTATATAGCAGCTCATTGCGAGCCTGTCACAACTGTTAACGTAAGTGCTGCCGACCTATCAACGCTGGATAGTAACGTCCAGTCGTTTGATGTTGGGCTTTATACGCGAGTCAAGGCCGCCCCGATGGGCTTTGATGCTGCATTTGAGTGCCAGGGTGCCAAGCGCAGCCTTAACGACCCGACAGACGATAAATACACGCTGGGCTGGACGTGGAATAGCCTGTCATCTATCAACAACCGCAAGAGCGTAGAGACGGCTCTAGGCATCGGCAAGCTGGAGCAAGCAACCACAGAGATAGATCAGGCTGCTAAAGACGCGGCGCAACAGGCGCAGACTGCGCAGGATGTTGCGAGCGCGGCAAACATAAATGCTACTGATGCAGTAACAAAAGCAGACAGCGCCAAAGAAGAAGCGACAAGCGCGAGCGATACTGCACAACGCGCAGAAGCGATATCTGCGGAAGCAAAGCAGACCGCAACGCAAGCAAATGGGGTTGCGCAAGACGCGAGCGAAACCGCTTCGACAGCGGCAATCACGGCGGCGCAGGCTGGCGCAACCGCTACCGAGGCAAAGAGTACCGCAACGCAGACAGCAAGCGACCTATCGAATTATGCGACTAATACCAACCTGATGCTGGAGGATATGCAAGGCCAGATCGACGGCAGCATCACGACATGGTTCTTCGCGGTTCCTCCGACAAACGAAAACGCACCAGCTAATGAGTGGACGACAACCGACCTCAAAAATAAACACCTTGGAGACTTGTACTACGACACCAACACCGGCTACTCGTACCGATGGCAAGTGCTCCAAAGCGTTTACTCTTGGCAGCGTATTACCGACGTTGATGTTACCAAGGCGCTTGCTGATGCCTCTAAGGCGCAGGATACCGCAGACGCTAAGCGTCGCGTATTTTACTCGCAGCCTGTACCACCTTATGACAAGGGAGACCTTTGGAGCCAAGGCACAAACGGAGAAATGCTCATATGCGCAACGCCTAAAACAGACGGTATGAGCTTTTTAGCTAGCGACTGGGGCAAGGCAACCAAGTACACAGACGATACAAAGGCTATTGAGGCCGAGAGATTAGCAGAAGAGGCAGCAAAGACAGCAACGGACTTTATCGACTTTGGAGCTGATGGGCTTATTGTCGGCGATATGACGGATGGTGCCCTTGCCGGAAACGTGCGAATCGCCTCGGACGGTATCGAGCTAAGGGACGGTACAAGTGTGCTAGCGCGCCTTAAAGCTGAATTATTAGAGCTTGCCGCTAACTCGGTTAACGCGATCATCAAGCTATGCGGCGGGTTGGGGACGATCAGGCAGTCGACCGAGAGATTCGCCGACGGCGACCACTCGTCCCTTACGATCGAATCGACCGAGTCGGTGGCGGTCAAGGGAGCCAATGCCCAGATAACTGCGACGGGGAGCGTGTTCGCCGGAAACGTCAAGAGCACGCCGTCCGATCCCGCCCAGTACTGCGGCCTCCAGGTGACCCCGAACGGCAGCGCGATAGTGTCGGGGTACGCAGCCACAGTCGGGTCGGCCACGAAAGTCTACCTGTCGAGCGACAAGAATCTGCCCGTCCAGATCAACGGCAGCGACATGGTCGACTTCGTGGTAGCCCAGGGCACGAGCGGGGGGTGGAGGTGGCGCAAGTGGGCGAGCGGGCTTGCTGAATGTGTTGGTAGCTTCTCCGTGAGTATCTCAACACCGACCGCGTGGGGTGCTGTATTTTACGGTAATGTGCCGCGCCAGTCGTATCCCTTTACATTTATTAGTACGCCCGAAGAATTTATAACTCTTCAGGGCGGATATTTCTGGATAATTGCCGATAACAACTCGAAAACTCAGACCAATATTGCCTATTGCGTAAGCGCTCGCGAGGTCGCGTCTATTAATGTTTGGATCGAATACAAGGTAGAGGGGCGGTGGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
01c51eab33a56e404a7439c9bbd4f43f84e62416a121927ff0584cfc7c76391b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphological and Genetic Characterization of Eggerthella lenta Bacteriophage PMBT5 Sprotte,S., Rasmussen,T.S., Cho,G.S., Brinks,E., Lametsch,R., Neve,H., Vogensen,F.K., Nielsen,D.S. and Franz,C.M.A.P. 2022 35893664 GenBank