Protein

View in Explore
Genbank accession
WZB37633.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATNTLNHISDDSKYKTFNPAGTSFPANITNVQAALAALKPIAVNGVPDSTETVKGIIRIATQQEVNDGDSANTVVTPKTLKERLGNPQATETTIGLTRYATSPEAVAGTVSNAAVVPTGLKAAIDNAFTTRTAKESVLGVIKLATIAMAEAGTDDTSAMTPLKTQRAIAKATAVLPVYGPATESVLGTVRIATNGQVAQGTLRDGYAVSPSGLASLTATSSRRGLARSATIAEVNANTAGDIFVTPNGLNQRVGTTSVKGLVKLTTTVGSGDANTALAYNADVVHTRGGQTINGNTTFGTARVNGRLDMGSGFINNQQIATVNMLVDSVPIGTIILWPGNNPPSSDWMHCHGTFLNRNDPQYSAIFSIIGTIYGGDATRFALPDMRGMFPRGVGKSNIMNQYSGNDAKGKPGLGAGCGNASLGQSMPQSVRKHKHESSWGEHHQRNEARNGCTVRNGYVGSNKTDYDNYKWFTNDGSEVEDASIRDGFGTMNTDGLMGDENRPWSIALNFVIKVR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 54199,98610 Da
isoelectric point:8,94533
aromaticity:0,05620
hydropathy:-0,28488

Domains

Domains [InterPro]
DC_0176
STR
1–467
DC_0176
SSF69349
STR
246–341
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
246–283
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
248–310
IPR015173 SSF88874
IPR011083
ATT
333–391
IPR011083
WZB37633.1
1 516
Architecture
STR
ATT
STR
STR 1-318 | ATT 319-391 | STR 392-515 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage COW86c
[NCBI] 		3138180 Viruses >
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZB37633.1 [NCBI]
Genbank nucleotide accession
PP597396.1 [NCBI]
CDS location
range 95227 -> 96777
strand +
CDS
ATGGCTACTAATACTCTAAATCACATTAGTGATGATTCAAAATATAAAACGTTTAATCCTGCTGGGACAAGTTTCCCAGCAAATATTACTAACGTCCAAGCTGCTTTGGCAGCTTTAAAACCAATTGCTGTTAATGGAGTTCCAGATTCAACTGAAACTGTAAAAGGCATTATTAGAATTGCTACGCAGCAAGAAGTTAATGATGGTGATTCAGCTAATACTGTTGTTACACCAAAAACTTTAAAAGAGCGACTTGGCAATCCACAGGCTACTGAAACTACAATTGGTCTTACAAGATACGCAACTTCTCCAGAAGCAGTAGCTGGAACAGTATCTAATGCTGCTGTTGTTCCTACTGGTTTAAAAGCTGCTATTGATAATGCATTTACAACCAGAACTGCAAAAGAATCGGTTCTTGGTGTAATTAAATTAGCAACTATTGCGATGGCTGAAGCTGGAACAGACGATACTTCTGCAATGACTCCTCTTAAAACTCAGAGAGCTATTGCTAAAGCTACTGCTGTTCTTCCAGTGTATGGACCTGCTACTGAATCCGTTCTTGGTACAGTTCGTATTGCAACTAATGGACAGGTCGCTCAAGGAACACTTCGTGATGGATATGCTGTATCACCAAGTGGATTAGCTTCATTAACTGCAACTTCTTCTCGCAGAGGACTTGCTCGTTCGGCTACAATTGCTGAAGTTAACGCAAATACCGCTGGAGATATTTTCGTTACACCAAACGGACTAAATCAGAGAGTTGGTACAACTTCTGTTAAGGGTCTTGTTAAATTAACCACTACCGTTGGTTCTGGAGATGCTAATACTGCTTTAGCATATAATGCTGATGTTGTTCATACTCGCGGCGGACAAACAATTAATGGAAATACTACATTTGGAACTGCTCGAGTAAATGGACGATTGGATATGGGTTCTGGCTTTATTAACAACCAGCAAATTGCTACTGTTAATATGCTAGTTGATTCTGTTCCAATTGGAACAATTATCTTGTGGCCTGGTAATAATCCTCCAAGTTCAGATTGGATGCATTGTCATGGAACATTTTTAAACAGAAATGACCCACAATATTCAGCGATATTCAGCATCATTGGTACGATTTATGGTGGCGATGCAACTAGATTTGCACTTCCTGATATGCGTGGTATGTTCCCTCGCGGTGTTGGTAAATCTAATATTATGAACCAATATTCAGGAAATGATGCTAAAGGTAAGCCTGGATTAGGTGCTGGTTGTGGTAATGCTTCATTAGGTCAATCTATGCCACAATCTGTTCGTAAACACAAGCATGAATCAAGTTGGGGCGAGCATCACCAACGAAACGAAGCTCGTAACGGATGTACTGTTCGTAACGGGTATGTTGGTTCTAATAAAACCGACTATGATAACTACAAATGGTTCACTAATGATGGTTCAGAAGTCGAAGACGCAAGTATTCGTGATGGTTTCGGCACAATGAATACCGACGGACTTATGGGTGATGAAAACCGTCCTTGGTCAATTGCTCTAAACTTTGTAATAAAAGTAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
171049edd05053327570ebd7d555bc42d829632cc839e12d0d4105e7b1a84b7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Could bacteriophages be used as a novel pest management tool to control gut endosymbionts in Western Flower Thrips? Krueger,S., Kroj,A., Lehnherr,T., Lehnherr,H. and Stuiver,M. 2024 — GenBank