Protein

View in Explore
Genbank accession
ATN93378.1 [GenBank]
Protein name
Kelch motif family protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSNKIADVFVDLEAGVELSVSDFVTVSPEEQKDTNIIAEFTRASTAYDSAKNLLSVNQPAQEAFQISTHRFVDIPNIYPVTPLDPNVVPESYTDALATIKQIAVDYPEWTYHNLADHEPLASGREQPALSYALDSGKPTFIMQIATHGNEKHSLLGVLEFIKVLMTSSAQEMVWARNNLCFMINCIHNVDGWALDRRRNGTDTSSVYTGINLNRNWDYFWDYAADPDKGDQPFAVPENRNFKHWLETNDRVGEGVLFFDYHSWRSRSIYGFLTDHIFPHGLEGQTLQRNLWRQANELVARRDFTGYTLNGGPSNMVFSERTSTRKPYAPYWAAQRMEKRKGFACQWEVPEGDESQAVNAMVIMDTVHAGILAAKDHLTTRRQGFLIDKGVDASAILNQNSNIQDWSTSQGRPLWMRFEGLVLVNNNGSADMFRPKSSAWPRQSAEMAYATYTDEVNPLNSFFIVMGGRSNNDGETGFCYAEPIQPPEPPPIGSNQYGIYKPERAQTTIDRLPEPTKAGAAVICNGYVYHLYGHTGTYNTDIQRLRIPTPAEGVAMVDALKLETWESVPTTGVAQNPVQRHSAIVRGTDIYIIGGRDGSDYLRDVHRLDTTTNELSLCTGQIPYKNGYFGIIEHPTKADTWFYFGGWNGVATKNDFFELVIDPTTHEVSTSRLADLPVALRGMGYFFNDDKTELNLLGGETASNVFTDNLHIYDIANDTWRTESPSPEEGAADSYFYSNALSDDEDPFDVASMKVSRGAMGYNNHELKFWYVGGERQYEDLTVDATDTFFEMDMSNKELSARVVNDVTYGTFRTSSSQPLNDPASPCTVVSTVQNKMEWTNEDEKKINPYVRTLCYLGNDFASTERWRHKYFVPPRNKKVSMPIYGPSSSQSATRCYAYMRLYGEGTKITHEGLQMIEGKILTPRMIPDAGIASERLRYRIGKDVEEVVGAYHSPLNERFDMELPIAEFKLKSKADDSDLANTVRLVHKFDKTAGTGMIVARQWDGSNVVKDLDILNFIPNYDLYTNMYKRDVVNFKFNREDNTITIWVYGTNYTTTIDWATAGEYYVHEVVAHYEEDAVAGLGFWLEGVTSTTDNLGS
Physico‐chemical
properties
protein length:1098 AA
molecular weight: 123886,66400 Da
isoelectric point:5,00782
aromaticity:0,11293
hydropathy:-0,47659

Domains

Domains [InterPro]
SSF53187
RBD
89–288
SSF53187 IPR015915
G3DSA:3.40.630.10
ATT
90–375
G3DSA:3.40.630.10 IPR015915
PTHR11705
Unmapped
91–270
PTHR11705 IPR006652
IPR000834
ENZ
134–271
IPR000834
ATN93378.1
1 1098
Architecture
ATT
STR
ATT 89-375 | STR 417-733 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATN93378.1
1 1098
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,2565
Central domain 48 254 208 0,3583
C-terminal 255 1098 843 0,4894
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-254
C-terminal
255-1098

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage J2-1_QLiu-2017
[NCBI] 		3117586 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas phenolica
[NCBI] 		161398 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATN93378.1 [NCBI]
Genbank nucleotide accession
MF988720 [NCBI]
CDS location
range 4362 -> 7658
strand +
CDS
ATGTCAAATAAAATAGCTGATGTCTTTGTTGATTTAGAAGCTGGTGTAGAGTTATCTGTCTCAGATTTCGTAACTGTTTCACCAGAAGAACAAAAAGATACAAACATCATTGCAGAGTTTACTAGAGCATCTACAGCTTATGACTCAGCAAAAAACCTCTTGTCGGTTAACCAACCAGCACAAGAAGCATTTCAAATTAGCACCCACAGATTTGTGGACATCCCAAACATCTACCCAGTAACACCGCTAGACCCAAACGTAGTACCAGAATCTTACACAGATGCTTTAGCTACTATTAAGCAGATTGCGGTGGATTACCCAGAATGGACATACCACAACCTAGCGGATCACGAACCCTTGGCGAGCGGGAGAGAACAGCCAGCATTAAGTTACGCACTTGATAGCGGCAAGCCAACGTTCATTATGCAAATAGCTACACACGGTAATGAAAAACATTCACTATTGGGTGTTCTTGAATTCATTAAGGTGTTGATGACATCTAGTGCGCAAGAGATGGTGTGGGCCAGAAACAACTTATGTTTTATGATCAACTGTATACACAATGTGGATGGTTGGGCTTTAGACAGAAGACGTAACGGTACAGATACTTCTAGTGTATACACAGGTATTAATCTTAACCGTAACTGGGATTACTTCTGGGACTACGCTGCTGACCCTGATAAGGGGGATCAACCTTTTGCCGTACCAGAAAACAGGAACTTTAAACATTGGTTAGAAACAAACGATCGTGTAGGTGAAGGTGTTCTTTTCTTCGACTACCATTCTTGGAGAAGCAGAAGTATTTATGGTTTCTTAACTGACCACATATTCCCACACGGATTAGAAGGACAAACTTTACAGAGAAACCTTTGGAGACAAGCAAACGAGCTTGTTGCAAGAAGAGATTTCACAGGTTACACTTTGAATGGTGGACCTAGTAATATGGTTTTCTCAGAACGTACATCTACCCGTAAACCTTACGCACCATACTGGGCTGCTCAGAGGATGGAAAAACGTAAAGGTTTTGCCTGTCAATGGGAAGTGCCAGAAGGTGACGAAAGCCAAGCAGTGAATGCTATGGTTATTATGGATACCGTACACGCAGGTATTCTTGCTGCTAAAGATCACTTGACAACAAGACGACAAGGGTTTTTAATAGATAAAGGTGTTGATGCTTCTGCCATATTAAACCAGAATTCAAACATCCAAGATTGGAGTACCTCCCAAGGTAGGCCTTTGTGGATGAGGTTTGAAGGATTGGTACTAGTTAATAATAACGGCAGTGCAGATATGTTCAGACCTAAGTCTAGTGCTTGGCCTAGACAATCTGCTGAAATGGCTTATGCAACTTACACAGATGAAGTTAACCCTTTGAATAGCTTCTTCATTGTGATGGGTGGTCGTAGTAACAATGATGGTGAGACAGGTTTTTGTTATGCAGAACCTATTCAACCACCAGAACCACCACCAATAGGTAGTAACCAATATGGTATATACAAACCAGAACGCGCTCAGACGACCATAGACAGGCTTCCAGAACCAACCAAGGCTGGTGCTGCGGTAATATGCAACGGTTATGTATACCACCTCTACGGACACACAGGAACGTATAATACTGACATACAAAGATTGAGAATACCTACACCAGCAGAAGGTGTTGCTATGGTTGACGCTCTTAAGTTGGAGACTTGGGAATCAGTTCCTACCACAGGTGTAGCTCAAAACCCAGTACAAAGACACAGTGCTATTGTAAGAGGTACAGATATTTACATTATAGGTGGTCGTGATGGAAGTGACTATCTTCGTGATGTTCATAGATTAGATACAACCACTAATGAACTAAGCTTGTGTACAGGACAAATACCTTATAAGAACGGTTATTTTGGTATCATAGAGCATCCTACGAAAGCAGATACTTGGTTTTATTTTGGTGGGTGGAACGGAGTAGCTACTAAGAATGATTTCTTTGAGCTTGTTATCGATCCAACAACACACGAAGTATCTACAAGCAGATTAGCAGATCTACCAGTTGCTTTACGTGGTATGGGATATTTCTTTAATGACGATAAGACAGAACTAAACCTTCTTGGGGGTGAGACAGCTTCTAACGTCTTTACAGACAATCTACACATATACGATATAGCCAACGATACTTGGAGAACAGAAAGTCCTTCTCCCGAAGAAGGTGCTGCTGATAGCTACTTCTACTCAAATGCTTTATCTGATGATGAAGATCCTTTTGACGTAGCGAGTATGAAAGTTAGTCGCGGTGCTATGGGCTATAATAATCACGAACTTAAGTTCTGGTATGTTGGTGGTGAAAGGCAGTATGAAGATCTCACTGTAGATGCAACAGATACTTTCTTCGAAATGGATATGTCTAACAAAGAACTATCTGCAAGGGTAGTTAATGATGTTACTTACGGAACTTTCAGAACATCATCTAGCCAACCATTAAACGATCCAGCTAGTCCGTGTACTGTAGTATCTACCGTCCAGAACAAGATGGAATGGACAAACGAGGATGAGAAGAAGATAAATCCATACGTCCGTACTCTGTGTTACCTAGGCAATGATTTCGCTAGCACTGAAAGATGGAGACACAAATACTTTGTACCTCCAAGAAATAAAAAGGTAAGTATGCCTATTTATGGTCCTAGCTCTAGCCAATCAGCAACCCGTTGTTATGCTTATATGAGATTATACGGTGAAGGTACAAAGATCACTCACGAAGGTCTACAGATGATCGAGGGTAAAATACTAACACCACGTATGATCCCTGATGCAGGGATTGCCTCTGAAAGACTACGCTACCGTATAGGTAAAGATGTTGAAGAAGTGGTAGGTGCATACCACAGCCCTCTCAATGAAAGATTTGATATGGAACTTCCTATTGCTGAGTTCAAACTTAAATCTAAAGCTGATGACTCAGACCTTGCAAATACTGTAAGACTTGTACACAAGTTTGATAAGACCGCAGGTACAGGTATGATTGTAGCAAGGCAGTGGGATGGAAGTAATGTTGTTAAGGATTTAGATATCCTAAACTTCATACCAAACTATGACCTTTACACTAATATGTACAAAAGGGATGTAGTAAACTTCAAATTCAACAGAGAAGATAACACGATAACAATCTGGGTGTACGGCACTAACTACACCACAACAATAGATTGGGCCACAGCAGGTGAATACTATGTTCACGAAGTAGTTGCACACTACGAAGAAGATGCAGTGGCTGGCTTAGGTTTCTGGTTAGAAGGTGTTACCTCAACCACAGATAATCTAGGTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
847ce8dab8fbae27418a9b9bd7dee0d227070ace8ebc52b2177323d6390a7d0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genomic Sequence of BacteriophageJ2-1: A Novel Pseudoalteromonas phenolica Phage Isolated from the Coastal Water of Qingdao, China Liu,Q. 2018-06 — GenBank