Protein

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Genbank accession
YP_010657189.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MQGRLSQITRFPIMKVLVDFDDMGYSDLSKWYDISDYVLEVTGSKEKEGEKTGGVTHDIVNFSVDNSDKHFNNDNPNSPYKGKIKSNIKFKLMAGFKEETLQVYAAGYIEAFEPTWKETKYNIKTIDYMKLFKKAEVPKESYRDVSLEQLINILCDTAGLPAHVVRKIPKTDFFYRYVKFDEENCFEALGNLIKAAVGSAYFEGEEFIVETKLALDYRLDTTEKCTINIDDMFEFDESVDASDIVNTVTISSQYKDIAPLEIVWETPENVVKIQNEIIKYLGGNSIKIDQANLPLINNKDEPIVLKNITQGKTIYIQAVDVNTGTITIHPDSLTNVGLNDMLSVSYSYQQLALLSLKERKFTIQFSDDIDSINALDVAVWDSKGEKKLVYSDKPDVTNTVSLQSFKFSAKDKRCEFILKNNYSGAITISTLQVRGYPIKVLNPIEVYVKNEPSILKYEKAEWAFQNNYINNIKLAQKIGQFIADNYSEHRKKLQIKIDGFPELKLNHVVKVVEPKSGTNHKFTVERINYAFSITNGWTMDLSLLELDKAPWIYESFKGESWENTNSGKPNMDFISEISANVIRNGGAELYTGFADYNDVQALDGKHLIPDYWRFVRETGNATSRIRSGGNLVLHGMNSFEITTTNSGSGYYEQVIDGIKPSNNYVLTFMASPDSCIGKGYLDFYNGAELLDSKVIDIDAYKTYEIKALSPDRTNKAVVRLKKVGGNNSDESIVFDKVKLENSDTSTPYIETDNSTAVQMKQKYANSLVLGNNYGIEVFDQNLDIKVRLGQYQAGKYGLQIFGGGINIINGLPEDQISDDATGKWNEASNTLKKLADDSIISILEKQVLKREFKSIELEYGSLLSIAKNYFPVEDGVVEISNYKLYFDKLKKYLTVEPDLNNGAAILAEPNMTRDSNVDPMLYAQRFSDYENAKLKLNEAIERRSKEMVEEANNLIESVKNQVTFSCDIYSTNGLTFVNGQKATKLYAVVRRGKEDITDLLDKTSFIWKKKDNNGNYDDAWNMAHIGVGKEVLLPDNDIFRRATFSCDIDLPE
Physico‐chemical
properties
protein length:1052 AA
molecular weight: 119112,12020 Da
isoelectric point:5,10070
aromaticity:0,10361
hydropathy:-0,41939

Domains

Domains [InterPro]
DC_0107
STR
4–548
DC_0107 DC_0977
DC_1862
STR
466–791
DC_1862 Coil
YP_010657189.1
1 1052
Architecture
STR
RBD
STR 4-791 | RBD 904-1050 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010657189.1
1 1052
Domain Start End Length (AA) Confidence
N-terminal 1 655 655 0,8516
Central domain 656 979 325 0,1599
C-terminal 980 1052 72 0,0206
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-655
Central
656-979
C-terminal
980-1052

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage pW4
[NCBI] 		2500560 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010657189.1 [NCBI]
Genbank nucleotide accession
NC_070844 [NCBI]
CDS location
range 30206 -> 33364
strand +
CDS
ATGCAAGGTCGTTTAAGTCAAATAACTAGATTCCCTATTATGAAAGTCCTTGTTGACTTTGACGATATGGGTTATTCTGATTTGAGTAAATGGTATGATATATCGGATTATGTATTGGAGGTTACTGGTAGCAAGGAAAAAGAAGGAGAAAAAACAGGTGGAGTTACGCATGATATCGTTAACTTTTCTGTAGATAATTCAGATAAGCATTTCAATAATGACAATCCTAACAGCCCGTACAAGGGTAAAATCAAAAGTAACATTAAGTTTAAGTTGATGGCCGGATTCAAAGAGGAAACATTACAAGTATATGCTGCTGGATATATTGAAGCATTTGAACCTACATGGAAAGAAACTAAGTACAATATCAAAACAATCGATTATATGAAGTTATTTAAAAAAGCTGAAGTTCCTAAAGAATCTTATCGTGATGTATCGTTAGAACAATTAATTAATATATTATGCGATACAGCCGGATTACCTGCTCACGTTGTTCGTAAGATTCCTAAAACTGATTTCTTTTATAGATATGTAAAGTTTGATGAAGAAAATTGTTTTGAAGCATTAGGTAATTTAATTAAAGCTGCTGTAGGTTCTGCTTATTTTGAAGGTGAAGAGTTTATTGTAGAAACAAAATTAGCTCTTGACTACAGATTAGATACAACTGAAAAATGCACAATCAATATTGATGATATGTTTGAATTCGATGAATCTGTAGACGCTTCAGATATCGTTAATACGGTCACTATCAGTTCGCAATACAAAGACATTGCCCCTCTCGAAATCGTGTGGGAAACGCCTGAGAATGTCGTTAAAATTCAAAATGAAATCATTAAGTATCTTGGTGGTAATTCAATTAAAATTGACCAAGCTAATTTACCTTTAATCAATAACAAAGATGAACCGATTGTACTAAAAAATATCACTCAAGGTAAAACTATTTATATACAAGCTGTAGATGTTAATACAGGTACAATCACAATTCATCCTGACAGTTTAACTAATGTTGGATTGAATGATATGTTATCGGTTAGTTATTCGTACCAACAGCTTGCTTTATTATCATTGAAGGAACGTAAGTTCACTATTCAATTCAGTGATGACATTGATTCAATAAACGCTTTAGATGTTGCTGTATGGGATTCCAAAGGTGAAAAGAAACTTGTCTATTCTGATAAGCCTGATGTAACGAACACTGTTTCATTACAGTCATTCAAATTTTCAGCAAAAGATAAACGTTGTGAATTCATTCTGAAGAATAACTATAGTGGCGCTATTACTATTTCTACATTGCAAGTACGCGGATATCCGATTAAAGTATTGAATCCAATTGAAGTGTACGTGAAGAATGAACCGTCTATTTTGAAGTACGAAAAGGCTGAGTGGGCATTCCAAAACAATTACATCAACAACATTAAGTTAGCTCAAAAGATTGGTCAGTTCATTGCTGATAATTACAGTGAACATCGTAAGAAGCTGCAAATTAAAATTGATGGATTCCCTGAACTAAAACTTAATCATGTTGTAAAAGTAGTTGAGCCTAAAAGTGGTACTAATCATAAGTTTACCGTTGAACGAATAAATTATGCATTCAGTATTACCAATGGTTGGACAATGGATTTAAGTTTACTTGAACTAGATAAAGCTCCTTGGATTTATGAATCGTTCAAAGGTGAATCATGGGAGAATACTAATTCCGGTAAACCTAACATGGATTTCATTAGTGAGATTAGCGCTAACGTGATCCGTAACGGTGGAGCTGAATTGTATACTGGATTCGCTGATTACAATGATGTACAAGCTTTAGATGGTAAACATTTAATTCCTGACTATTGGCGTTTCGTACGTGAGACAGGTAACGCAACGTCGCGTATTCGTTCCGGTGGTAATTTAGTGCTGCATGGTATGAACAGTTTTGAAATCACAACTACAAATAGTGGTAGTGGTTATTACGAACAAGTTATAGATGGCATCAAGCCAAGTAATAATTACGTTTTAACGTTCATGGCAAGTCCTGACTCCTGTATTGGTAAGGGCTATTTAGATTTTTATAATGGTGCTGAGTTACTGGACAGCAAGGTTATAGACATAGATGCTTATAAAACGTATGAGATAAAAGCACTTAGCCCTGACCGAACGAATAAGGCTGTTGTTCGTCTGAAGAAAGTCGGTGGAAATAATAGCGATGAATCAATTGTATTTGACAAAGTTAAATTAGAGAATTCCGATACGTCAACGCCTTATATTGAAACTGACAATTCAACAGCTGTTCAAATGAAACAGAAATATGCTAACTCTTTAGTGCTTGGCAATAATTATGGTATTGAAGTATTCGACCAAAACTTAGATATTAAAGTCAGACTAGGACAATACCAAGCTGGTAAATATGGACTACAGATATTTGGCGGTGGTATTAATATCATCAATGGATTACCTGAAGACCAAATTTCAGATGATGCTACAGGTAAATGGAACGAAGCAAGTAACACCCTGAAAAAGTTAGCTGATGACAGTATAATTTCGATTTTAGAAAAACAAGTTCTGAAGCGTGAATTTAAATCGATTGAGCTTGAATATGGATCGTTATTGTCTATCGCTAAAAACTATTTCCCTGTTGAAGATGGAGTTGTAGAAATTTCTAACTACAAACTGTATTTCGATAAGTTGAAAAAGTATTTAACCGTTGAACCTGATTTAAATAACGGCGCTGCTATTTTAGCTGAACCAAATATGACAAGGGATAGTAATGTTGATCCAATGTTATATGCACAAAGATTTTCTGATTATGAAAATGCTAAACTGAAATTAAATGAAGCTATCGAAAGACGTTCAAAAGAAATGGTTGAAGAAGCTAATAATTTAATTGAATCAGTTAAGAATCAGGTTACGTTTTCTTGTGACATATACAGTACGAACGGTTTAACTTTTGTCAACGGACAAAAAGCAACTAAGTTATATGCGGTTGTTCGTAGAGGTAAGGAAGATATAACAGACCTGCTTGATAAAACGTCATTCATTTGGAAGAAGAAAGATAACAACGGAAATTACGATGATGCATGGAATATGGCTCACATTGGAGTAGGTAAAGAAGTTTTACTTCCTGACAATGATATTTTTAGACGTGCAACATTTTCTTGTGACATTGACCTCCCTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73667035ea68512a8d0528ac5f6fdff233550ee990afe543d55d9ebe7cdde3ec
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel siphovirus infecting Emetic Bacillus cereus Hu,X., Wan,X., Geng,P. and Yuan,Z. 2017-09-08 — GenBank