Protein

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Genbank accession
YP_010093464.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MEIGVVTPLYKNMFKETQGYVKDLPEVMQPFYLDELRSEPLLDDNGEQVLQEEEYEYLDENGDTQTGVRMVPVFHDVNYVVEKPRYDLKSWDYVDKAKKYEAKINGIHKACEAEQWAYHDEYVEWYFRPEPKRARNEDGTLIGDDPETPENEAWENGFTPEMYAAQPEPINTSTEPEPIIEELHQELAKQTRDEAVKENISMFGGEWQVRDKDMINAQDAIDEAEFLGLPPEATEPWILADNSIRPTTALELKQIKSARAQHKSSVFAAYAIWREGDKLTPFII
Physico‐chemical
properties
protein length:284 AA
molecular weight: 32943,23340 Da
isoelectric point:4,43318
aromaticity:0,10563
hydropathy:-0,78486

Domains

Domains [InterPro]
DC_2157
STR
1–187
DC_2157 IPR025484
YP_010093464.1
1 284
Architecture
STR
STR 1-271 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.245.O._10N.261.54.C7
[NCBI] 		1881236 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010093464.1 [NCBI]
Genbank nucleotide accession
NC_055736.1 [NCBI]
CDS location
range 13128 -> 13982
strand +
CDS
ATGGAGATTGGGGTGGTAACACCCCTCTATAAAAATATGTTTAAAGAAACACAAGGTTACGTGAAAGACTTGCCTGAAGTAATGCAACCTTTCTACCTAGACGAATTACGTTCTGAGCCTTTGCTTGATGACAATGGTGAGCAGGTACTGCAGGAAGAGGAATATGAATACTTAGATGAGAATGGAGACACTCAAACTGGTGTTCGTATGGTTCCTGTTTTCCATGATGTTAACTACGTAGTAGAGAAGCCACGATATGATCTGAAGTCATGGGATTATGTTGATAAAGCTAAAAAATATGAAGCTAAGATCAATGGTATCCACAAAGCCTGCGAAGCTGAGCAATGGGCTTACCATGATGAATACGTAGAATGGTATTTCAGACCTGAACCAAAACGAGCTAGAAATGAAGATGGTACGTTAATTGGTGATGATCCGGAGACCCCTGAGAATGAGGCATGGGAGAATGGTTTCACGCCTGAGATGTATGCTGCACAACCTGAACCAATTAATACCTCTACCGAACCTGAACCAATTATTGAAGAACTTCATCAAGAGTTAGCTAAACAGACTCGTGACGAGGCAGTAAAGGAGAACATTTCAATGTTTGGCGGAGAATGGCAGGTACGGGATAAGGATATGATTAATGCCCAAGATGCCATTGATGAAGCTGAGTTCTTAGGGTTACCTCCTGAAGCTACCGAACCATGGATTCTTGCGGATAACTCTATCCGTCCTACGACTGCCCTAGAGCTAAAGCAAATCAAGTCTGCTCGTGCTCAACATAAGTCATCCGTATTTGCTGCCTATGCCATATGGAGGGAGGGGGATAAGCTCACTCCATTCATTATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7b5ebc771c9878cc534b253d1963884e8bec7184834d3babd91af93491af7077
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9094
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank